RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 MEX3AA1L020 520 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 ZNF737O75373 536 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 DEDDO75618 318 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 CEACAM6P40199 344 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 KRBOX4Q5JUW0 171 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 TUBAL3A6NHL2 446 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 CDS2O95674 445 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 LHBP01229 141 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 CTRB1P17538 263 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 UCP1P25874 307 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 SELENOVP59797 346 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 FAM201AQ5SY85 155 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 CTRB2Q6GPI1 263 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 MRGPRDQ8TDS7 321 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 WFIKKN1Q96NZ8 548 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 CYTL1Q9NRR1 136 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 KCNIP1Q9NZI2 227 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 ZMAT5Q9UDW3 170 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 TMED3Q9Y3Q3 217 aa14.26□□□□□ -0.13
SHKBP1-216ENST00000598201 NKX2-6A6NCS4 301 aa14.25□□□□□ -0.13
SHKBP1-216ENST00000598201 CCL21O00585 134 aa14.25□□□□□ -0.13
SHKBP1-216ENST00000598201 SRPXP78539 464 aa14.25□□□□□ -0.13
SHKBP1-216ENST00000598201 FAM74A1Q5RGS3 127 aa14.25□□□□□ -0.13
SHKBP1-216ENST00000598201 ZNF695Q8IW36 515 aa14.25□□□□□ -0.13
SHKBP1-216ENST00000598201 OR13A1Q8NGR1 328 aa14.25□□□□□ -0.13
SHKBP1-216ENST00000598201 CXorf58Q96LI9 332 aa14.25□□□□□ -0.13
SHKBP1-216ENST00000598201 AIFM2Q9BRQ8 373 aa14.25□□□□□ -0.13
SHKBP1-216ENST00000598201 DCTN5Q9BTE1 182 aa14.25□□□□□ -0.13
SHKBP1-216ENST00000598201 DNAJB11Q9UBS4 358 aa14.25□□□□□ -0.13
SHKBP1-216ENST00000598201 OOEPA6NGQ2 149 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 H0Y980 276 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 K7EPK0 472 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 HBZP02008 142 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 OR8U9P0C7N5 309 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 HKR1P10072 659 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 F2RP25116 425 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 GATA4P43694 442 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 TNFAIP6P98066 277 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 ADIPOQQ15848 244 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 ESCO2Q56NI9 601 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 COMMD7Q86VX2 200 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 FAM71E2Q8N5Q1 922 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 OR52L2PQ8NGH6 319 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 OR8U1Q8NH10 309 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 OR51H1Q8NH63 302 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 GCM1Q9NP62 436 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 CACNA1DQ01668 2161 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 ROS1P08922 2347 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 SSTR5P35346 364 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 NUP62P37198 522 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 EDDM3AQ14507 147 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 GNMTQ14749 295 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 FAM90A1Q86YD7 464 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 GALMQ96C23 342 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 PPP1R3CQ9UQK1 317 aa14.24□□□□□ -0.13
SHKBP1-216ENST00000598201 OR4A8P0C604 315 aa14.23□□□□□ -0.13
SHKBP1-216ENST00000598201 RRASP10301 218 aa14.23□□□□□ -0.13
SHKBP1-216ENST00000598201 PLA2G2AP14555 144 aa14.23□□□□□ -0.13
SHKBP1-216ENST00000598201 CD80P33681 288 aa14.23□□□□□ -0.13
SHKBP1-216ENST00000598201 SNTB1Q13884 538 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-216ENST00000598201 ADAM5Q6NVV9 412 aa14.23□□□□□ -0.13
SHKBP1-216ENST00000598201 TGIF2LYQ8IUE0 185 aa14.23□□□□□ -0.13
SHKBP1-216ENST00000598201 OR5D13Q8NGL4 314 aa14.23□□□□□ -0.13
SHKBP1-216ENST00000598201 OR4D5Q8NGN0 318 aa14.23□□□□□ -0.13
SHKBP1-216ENST00000598201 DNTTIP1Q9H147 329 aa14.23□□□□□ -0.13
SHKBP1-216ENST00000598201 IL19Q9UHD0 177 aa14.23□□□□□ -0.13
SHKBP1-216ENST00000598201 RBM7Q9Y580 266 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-216ENST00000598201 IL2RGP31785 369 aa14.22□□□□□ -0.13
SHKBP1-216ENST00000598201 SMCO1Q147U7 214 aa14.22□□□□□ -0.13
SHKBP1-216ENST00000598201 CCDC28AQ8IWP9 274 aa14.22□□□□□ -0.13
SHKBP1-216ENST00000598201 ZNRF1Q8ND25 227 aa14.22□□□□□ -0.13
SHKBP1-216ENST00000598201 RBPMSQ93062 196 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-216ENST00000598201 KCNS2Q9ULS6 477 aa14.22□□□□□ -0.13
SHKBP1-216ENST00000598201 ADAM20O43506 726 aa14.22□□□□□ -0.13
SHKBP1-216ENST00000598201 RPL12P30050 165 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-216ENST00000598201 PAX5Q02548 391 aa14.22□□□□□ -0.13
SHKBP1-216ENST00000598201 C4orf17Q53FE4 359 aa14.22□□□□□ -0.13
SHKBP1-216ENST00000598201 RFESDQ8TAC1 157 aa14.22□□□□□ -0.13
SHKBP1-216ENST00000598201 STOML3Q8TAV4 291 aa14.22□□□□□ -0.13
SHKBP1-216ENST00000598201 ESRP2Q9H6T0 727 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-216ENST00000598201 ZDHHC8Q9ULC8 765 aa14.22□□□□□ -0.13
SHKBP1-216ENST00000598201 CYB5R3P00387 301 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-216ENST00000598201 S100GP29377 79 aa14.21□□□□□ -0.13
SHKBP1-216ENST00000598201 NMSQ5H8A3 153 aa14.21□□□□□ -0.13
SHKBP1-216ENST00000598201 ZCCHC24Q8N2G6 241 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-216ENST00000598201 DRAM1Q8N682 238 aa14.21□□□□□ -0.13
SHKBP1-216ENST00000598201 SEBOXQ9HB31 216 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-216ENST00000598201 DCAF16Q9NXF7 216 aa14.21□□□□□ -0.13
SHKBP1-216ENST00000598201 RNF7Q9UBF6 113 aa14.21□□□□□ -0.13
SHKBP1-216ENST00000598201 RNF150Q9ULK6 438 aa14.21□□□□□ -0.13
SHKBP1-216ENST00000598201 SELLP14151 372 aa14.21□□□□□ -0.14
SHKBP1-216ENST00000598201 PPP1CCP36873 323 aaKnown RBP14.21□□□□□ -0.14
SHKBP1-216ENST00000598201 FAM222BQ8WU58 562 aa14.21□□□□□ -0.14
SHKBP1-216ENST00000598201 ARL11Q969Q4 196 aa14.21□□□□□ -0.14
SHKBP1-216ENST00000598201 PHYHIPLQ96FC7 376 aa14.21□□□□□ -0.14
SHKBP1-216ENST00000598201 AKR1E2Q96JD6 320 aa14.21□□□□□ -0.14
SHKBP1-216ENST00000598201 SNX22Q96L94 193 aa14.21□□□□□ -0.14
SHKBP1-216ENST00000598201 LURAP1Q96LR2 239 aa14.21□□□□□ -0.14
SHKBP1-216ENST00000598201 IGHV3-43A0A0B4J1X8 118 aa14.2□□□□□ -0.14
SHKBP1-216ENST00000598201 A0A0G2JRQ6 117 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms