RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 BUB1B-PAK6H3BSN5 160 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 TRIM77I1YAP6 450 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 HOXA3O43365 443 aaPredicted RBP16.45■□□□□ 0.22
PNKP-211ENST00000598020 APOA1P02647 267 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 FCGR3AP08637 254 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 DTYMKP23919 212 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 UBA52P62987 128 aaKnown RBP16.45■□□□□ 0.22
PNKP-211ENST00000598020 HLA-DRB3P79483 266 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 ARFRP1Q13795 201 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 MZT2AQ6P582 158 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 ZNF439Q8NDP4 499 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 SETD6Q8TBK2 473 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 DYNC2LI1Q8TCX1 351 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 LEAP2Q969E1 77 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 RBM38Q9H0Z9 239 aaKnown RBP16.45■□□□□ 0.22
PNKP-211ENST00000598020 DPAGT1Q9H3H5 408 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 OR2S2Q9NQN1 319 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 COMMD3Q9UBI1 195 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 GNG12Q9UBI6 72 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 TRAV18A0A075B6X5 111 aa16.44■□□□□ 0.22
PNKP-211ENST00000598020 IGHV3-43A0A0B4J1X8 118 aa16.44■□□□□ 0.22
PNKP-211ENST00000598020 TMEM235A6NFC5 223 aa16.44■□□□□ 0.22
PNKP-211ENST00000598020 TRDCB7Z8K6 153 aa16.44■□□□□ 0.22
PNKP-211ENST00000598020 ZNF701M0R085 212 aaPredicted RBP16.44■□□□□ 0.22
PNKP-211ENST00000598020 YPEL1O60688 119 aa16.44■□□□□ 0.22
PNKP-211ENST00000598020 RNASE1P07998 156 aaKnown RBP16.44■□□□□ 0.22
PNKP-211ENST00000598020 IGHV3-43DP0DP04 118 aa16.44■□□□□ 0.22
PNKP-211ENST00000598020 SOX6P35712 828 aa16.44■□□□□ 0.22
PNKP-211ENST00000598020 TALDO1P37837 337 aa16.44■□□□□ 0.22
PNKP-211ENST00000598020 CEACAM3P40198 252 aa16.44■□□□□ 0.22
PNKP-211ENST00000598020 MORN2Q502X0 79 aa16.44■□□□□ 0.22
PNKP-211ENST00000598020 C5orf24Q7Z6I8 188 aa16.44■□□□□ 0.22
PNKP-211ENST00000598020 DYNAPQ8N1N2 210 aa16.44■□□□□ 0.22
PNKP-211ENST00000598020 YPEL2Q96QA6 119 aa16.44■□□□□ 0.22
PNKP-211ENST00000598020 OCSTAMPQ9BR26 566 aa16.44■□□□□ 0.22
PNKP-211ENST00000598020 AUNIPQ9H7T9 357 aa16.44■□□□□ 0.22
PNKP-211ENST00000598020 CCDC59Q9P031 241 aaKnown RBP16.44■□□□□ 0.22
PNKP-211ENST00000598020 ELF5Q9UKW6 265 aaPredicted RBP16.44■□□□□ 0.22
PNKP-211ENST00000598020 AMMECR1Q9Y4X0 333 aaPredicted RBP16.44■□□□□ 0.22
PNKP-211ENST00000598020 OOSP1A8MZH6 123 aa16.43■□□□□ 0.22
PNKP-211ENST00000598020 RGS11O94810 467 aa16.43■□□□□ 0.22
PNKP-211ENST00000598020 DIRAS3O95661 229 aa16.43■□□□□ 0.22
PNKP-211ENST00000598020 KIR2DS4P43632 304 aa16.43■□□□□ 0.22
PNKP-211ENST00000598020 DYNLT3P51808 116 aa16.43■□□□□ 0.22
PNKP-211ENST00000598020 KIR2DS1Q14954 304 aa16.43■□□□□ 0.22
PNKP-211ENST00000598020 SSX2Q16385 188 aa16.43■□□□□ 0.22
PNKP-211ENST00000598020 LRRC75BQ2VPJ9 315 aa16.43■□□□□ 0.22
PNKP-211ENST00000598020 FAM53AQ6NSI3 398 aaPredicted RBP16.43■□□□□ 0.22
PNKP-211ENST00000598020 SLC25A48Q6ZT89 311 aaKnown RBP16.43■□□□□ 0.22
PNKP-211ENST00000598020 OR52L2PQ8NGH6 319 aa16.43■□□□□ 0.22
PNKP-211ENST00000598020 OR5R1Q8NH85 324 aa16.43■□□□□ 0.22
PNKP-211ENST00000598020 FAM216AQ8WUB2 273 aa16.43■□□□□ 0.22
PNKP-211ENST00000598020 IGHV3-7P01780 117 aa16.42■□□□□ 0.22
PNKP-211ENST00000598020 IGHV4-59P01825 116 aa16.42■□□□□ 0.22
PNKP-211ENST00000598020 EIF4EP06730 217 aaKnown RBP16.42■□□□□ 0.22
PNKP-211ENST00000598020 SCTP09683 121 aa16.42■□□□□ 0.22
PNKP-211ENST00000598020 GNG10P50151 68 aa16.42■□□□□ 0.22
PNKP-211ENST00000598020 GNG2P59768 71 aa16.42■□□□□ 0.22
PNKP-211ENST00000598020 SRSF2Q01130 221 aaKnown RBP16.42■□□□□ 0.22
PNKP-211ENST00000598020 TPTE2P1Q5T6R2 138 aa16.42■□□□□ 0.22
PNKP-211ENST00000598020 OR4A4PQ8NGN8 299 aa16.42■□□□□ 0.22
PNKP-211ENST00000598020 SSX3Q99909 188 aa16.42■□□□□ 0.22
PNKP-211ENST00000598020 ITGB1BP1O14713 200 aa16.41■□□□□ 0.22
PNKP-211ENST00000598020 FABP7O15540 132 aa16.41■□□□□ 0.22
PNKP-211ENST00000598020 SSX5O60225 188 aa16.41■□□□□ 0.22
PNKP-211ENST00000598020 ZNF134P52741 427 aa16.41■□□□□ 0.22
PNKP-211ENST00000598020 MADCAM1Q13477 382 aa16.41■□□□□ 0.22
PNKP-211ENST00000598020 GNMTQ14749 295 aa16.41■□□□□ 0.22
PNKP-211ENST00000598020 CT45A1Q5HYN5 189 aa16.41■□□□□ 0.22
PNKP-211ENST00000598020 OR10V1Q8NGI7 309 aa16.41■□□□□ 0.22
PNKP-211ENST00000598020 OR10X1Q8NGY0 326 aa16.41■□□□□ 0.22
PNKP-211ENST00000598020 CT45A3Q8NHU0 189 aa16.41■□□□□ 0.22
PNKP-211ENST00000598020 PIFOQ8TCI5 191 aa16.41■□□□□ 0.22
PNKP-211ENST00000598020 NUDCD2Q8WVJ2 157 aa16.41■□□□□ 0.22
PNKP-211ENST00000598020 IL1F10Q8WWZ1 152 aa16.41■□□□□ 0.22
PNKP-211ENST00000598020 TOLLIPQ9H0E2 274 aa16.41■□□□□ 0.22
PNKP-211ENST00000598020 RSL24D1Q9UHA3 163 aaKnown RBP16.41■□□□□ 0.22
PNKP-211ENST00000598020 ZNF230Q9UIE0 474 aaPredicted RBP16.41■□□□□ 0.22
PNKP-211ENST00000598020 HILPDAQ9Y5L2 63 aa16.41■□□□□ 0.22
PNKP-211ENST00000598020 IGKV1-6A0A0C4DH72 117 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 A0A1W2PPE3 182 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 BTBD17A6NE02 478 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 HPGDSO60760 199 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 ELK1P19419 428 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 ZBTB25P24278 435 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 PAX6P26367 422 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 PPP1CCP36873 323 aaKnown RBP16.4■□□□□ 0.22
PNKP-211ENST00000598020 MNDAP41218 407 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 ZNF137PP52743 207 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 KRTAP24-1Q3LI83 254 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 TMEM69Q5SWH9 247 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 CCDC144NLQ6NUI1 221 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 C16orf87Q6PH81 154 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 TMEM158Q8WZ71 300 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 DUX5Q96PT3 197 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 CABLES2Q9BTV7 478 aa16.4■□□□□ 0.22
PNKP-211ENST00000598020 SMIM31A0A1B0GVY4 71 aa16.39■□□□□ 0.21
PNKP-211ENST00000598020 SLC31A2O15432 143 aa16.39■□□□□ 0.21
PNKP-211ENST00000598020 GSTT2P0CG29 244 aa16.39■□□□□ 0.21
PNKP-211ENST00000598020 GSTT2BP0CG30 244 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms