RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 ZNF260Q3ZCT1 412 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 C6orf183Q5T699 404 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 FAM27D1Q5T7N8 215 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 DDI2Q5TDH0 399 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 ZNF497Q6ZNH5 498 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 SPARTQ8N0X7 666 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 FAM71E2Q8N5Q1 922 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 OR11H1Q8NG94 326 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 UBE2E2Q96LR5 201 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 TAS2R4Q9NYW5 299 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 GNG12Q9UBI6 72 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 SMAD5-AS1Q9Y6J3 95 aa13.31□□□□□ -0.28
PNKP-210ENST00000597965 TRAV39A0A0B4J263 110 aa13.3□□□□□ -0.28
PNKP-210ENST00000597965 CDRT1O95170 752 aa13.3□□□□□ -0.28
PNKP-210ENST00000597965 SERPINA2P20848 420 aa13.3□□□□□ -0.28
PNKP-210ENST00000597965 BDKRB2P30411 391 aa13.3□□□□□ -0.28
PNKP-210ENST00000597965 CFHR3Q02985 330 aa13.3□□□□□ -0.28
PNKP-210ENST00000597965 RPL22L1Q6P5R6 122 aaKnown RBP13.3□□□□□ -0.28
PNKP-210ENST00000597965 SLC25A48Q6ZT89 311 aaKnown RBP13.3□□□□□ -0.28
PNKP-210ENST00000597965 ZNF429Q86V71 674 aa13.3□□□□□ -0.28
PNKP-210ENST00000597965 CCDC107Q8WV48 283 aa13.3□□□□□ -0.28
PNKP-210ENST00000597965 MRPS24Q96EL2 167 aaKnown RBP13.3□□□□□ -0.28
PNKP-210ENST00000597965 KCTD7Q96MP8 289 aa13.3□□□□□ -0.28
PNKP-210ENST00000597965 FKBP14Q9NWM8 211 aa13.3□□□□□ -0.28
PNKP-210ENST00000597965 CKLFQ9UBR5 152 aa13.3□□□□□ -0.28
PNKP-210ENST00000597965 PSORS1C1Q9UIG5 152 aa13.3□□□□□ -0.28
PNKP-210ENST00000597965 ZNF107Q9UII5 783 aaPredicted RBP13.3□□□□□ -0.28
PNKP-210ENST00000597965 TRAPPC2LQ9UL33 140 aa13.3□□□□□ -0.28
PNKP-210ENST00000597965 MCRIP1C9JLW8 97 aa13.29□□□□□ -0.28
PNKP-210ENST00000597965 E9PI62 339 aa13.29□□□□□ -0.28
PNKP-210ENST00000597965 CA11O75493 328 aa13.29□□□□□ -0.28
PNKP-210ENST00000597965 MT-ND4P03905 459 aa13.29□□□□□ -0.28
PNKP-210ENST00000597965 NKAPLQ5M9Q1 402 aa13.29□□□□□ -0.28
PNKP-210ENST00000597965 XAF1Q6GPH4 301 aa13.29□□□□□ -0.28
PNKP-210ENST00000597965 TMPRSS11AQ6ZMR5 421 aa13.29□□□□□ -0.28
PNKP-210ENST00000597965 GGHQ92820 318 aa13.29□□□□□ -0.28
PNKP-210ENST00000597965 DGCR14Q96DF8 476 aaKnown RBP13.29□□□□□ -0.28
PNKP-210ENST00000597965 RBM38Q9H0Z9 239 aaKnown RBP13.29□□□□□ -0.28
PNKP-210ENST00000597965 MRPS18AQ9NVS2 196 aaKnown RBP13.29□□□□□ -0.28
PNKP-210ENST00000597965 RYR3Q15413 4870 aa13.29□□□□□ -0.28
PNKP-210ENST00000597965 LY86O95711 162 aa13.28□□□□□ -0.28
PNKP-210ENST00000597965 RUNX1Q01196 453 aa13.28□□□□□ -0.28
PNKP-210ENST00000597965 ZNF616Q08AN1 781 aa13.28□□□□□ -0.28
PNKP-210ENST00000597965 MMDQ15546 238 aa13.28□□□□□ -0.28
PNKP-210ENST00000597965 SYT6Q5T7P8 510 aaPredicted RBP13.28□□□□□ -0.28
PNKP-210ENST00000597965 OR52I1Q8NGK6 324 aa13.28□□□□□ -0.28
PNKP-210ENST00000597965 OR1N2Q8NGR9 330 aa13.28□□□□□ -0.28
PNKP-210ENST00000597965 HSPB9Q9BQS6 159 aa13.28□□□□□ -0.28
PNKP-210ENST00000597965 VSIG4Q9Y279 399 aa13.28□□□□□ -0.28
PNKP-210ENST00000597965 ERGIC3Q9Y282 383 aa13.28□□□□□ -0.28
PNKP-210ENST00000597965 CEPT1Q9Y6K0 416 aa13.28□□□□□ -0.28
PNKP-210ENST00000597965 SORL1Q92673 2214 aa13.27□□□□□ -0.28
PNKP-210ENST00000597965 IGHV3-43A0A0B4J1X8 118 aa13.27□□□□□ -0.29
PNKP-210ENST00000597965 IRGMA1A4Y4 181 aa13.27□□□□□ -0.29
PNKP-210ENST00000597965 RGS10O43665 173 aa13.27□□□□□ -0.29
PNKP-210ENST00000597965 LANCL1O43813 399 aa13.27□□□□□ -0.29
PNKP-210ENST00000597965 IGHV3-43DP0DP04 118 aa13.27□□□□□ -0.29
PNKP-210ENST00000597965 F2RL1P55085 397 aa13.27□□□□□ -0.29
PNKP-210ENST00000597965 SLC22A6Q4U2R8 563 aa13.27□□□□□ -0.29
PNKP-210ENST00000597965 PRSS48Q7RTY5 328 aa13.27□□□□□ -0.29
PNKP-210ENST00000597965 GPR141Q7Z602 305 aa13.27□□□□□ -0.29
PNKP-210ENST00000597965 ZNF554Q86TJ5 538 aa13.27□□□□□ -0.29
PNKP-210ENST00000597965 MYOZ3Q8TDC0 251 aa13.27□□□□□ -0.29
PNKP-210ENST00000597965 GHITMQ9H3K2 345 aa13.27□□□□□ -0.29
PNKP-210ENST00000597965 AMBNQ9NP70 447 aa13.27□□□□□ -0.29
PNKP-210ENST00000597965 ETAA1Q9NY74 926 aa13.27□□□□□ -0.29
PNKP-210ENST00000597965 STAB2Q8WWQ8 2551 aa13.27□□□□□ -0.29
PNKP-210ENST00000597965 C12orf77C9JDV5 145 aa13.26□□□□□ -0.29
PNKP-210ENST00000597965 NEDD8Q15843 81 aa13.26□□□□□ -0.29
PNKP-210ENST00000597965 ZNF439Q8NDP4 499 aa13.26□□□□□ -0.29
PNKP-210ENST00000597965 MUC7Q8TAX7 377 aa13.26□□□□□ -0.29
PNKP-210ENST00000597965 RGP1Q92546 391 aaPredicted RBP13.26□□□□□ -0.29
PNKP-210ENST00000597965 MUL1Q969V5 352 aa13.26□□□□□ -0.29
PNKP-210ENST00000597965 ASCL2Q99929 193 aa13.26□□□□□ -0.29
PNKP-210ENST00000597965 OR51J1Q9H342 316 aa13.26□□□□□ -0.29
PNKP-210ENST00000597965 KCNIP1Q9NZI2 227 aa13.26□□□□□ -0.29
PNKP-210ENST00000597965 RCC2Q9P258 522 aaKnown RBP13.26□□□□□ -0.29
PNKP-210ENST00000597965 FAM90A10PA6NDY2 464 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 FAM90A7PA6NKC0 464 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 FAM90A23PA8MXZ1 464 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 ZNF736B4DX44 427 aaPredicted RBP13.25□□□□□ -0.29
PNKP-210ENST00000597965 I3L521 148 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 RGS11O94810 467 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 GLAP06280 429 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 CDK1P06493 297 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 DCKP27707 260 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 LSAMPQ13449 338 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 CNPY1Q3B7I2 92 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 CT45A1Q5HYN5 189 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 AHSA2Q719I0 299 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 CDH26Q8IXH8 852 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 PRR18Q8N4B5 295 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 ZNF491Q8N8L2 437 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 OR13F1Q8NGS4 319 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 CT45A3Q8NHU0 189 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 UBALD1Q8TB05 177 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 SMIM19Q96E16 107 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 ZNF251Q9BRH9 671 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 CCDC90BQ9GZT6 254 aa13.25□□□□□ -0.29
PNKP-210ENST00000597965 VCX3AQ9NNX9 186 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms