RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 LINC01548A6NM66 108 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 NCBP2LA6PVI3 153 aaKnown RBP11.93□□□□□ -0.5
LIG1-215ENST00000597901 ZNF736B4DX44 427 aaPredicted RBP11.93□□□□□ -0.5
LIG1-215ENST00000597901 SLC22A1O15245 554 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 RGS10O43665 173 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 HSMCR30P0CW71 290 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 HTR2CP28335 458 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 CD1BP29016 333 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 RPS27AP62979 156 aaKnown RBP11.93□□□□□ -0.5
LIG1-215ENST00000597901 QRFPP83859 136 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 MORN2Q502X0 79 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 NKAPLQ5M9Q1 402 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 ZNF554Q86TJ5 538 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 ZNF329Q86UD4 541 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 Q8N6K4 173 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 OR52L2PQ8NGH6 319 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 KCNG3Q8TAE7 436 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 NOL4LQ96MY1 436 aaPredicted RBP11.93□□□□□ -0.5
LIG1-215ENST00000597901 SULT4A1Q9BR01 284 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 ANKRD60Q9BZ19 345 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 ISYNA1Q9NPH2 558 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 OR2S2Q9NQN1 319 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 PLSCR3Q9NRY6 295 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 LRRC42Q9Y546 428 aa11.93□□□□□ -0.5
LIG1-215ENST00000597901 SERPINE3A8MV23 424 aa11.92□□□□□ -0.5
LIG1-215ENST00000597901 IGHG2P01859 326 aa11.92□□□□□ -0.5
LIG1-215ENST00000597901 PF4V1P10720 104 aa11.92□□□□□ -0.5
LIG1-215ENST00000597901 CRHBPP24387 322 aa11.92□□□□□ -0.5
LIG1-215ENST00000597901 CHATP28329 748 aa11.92□□□□□ -0.5
LIG1-215ENST00000597901 ZNF137PP52743 207 aa11.92□□□□□ -0.5
LIG1-215ENST00000597901 REC114Q7Z4M0 266 aa11.92□□□□□ -0.5
LIG1-215ENST00000597901 C6orf201Q7Z4U5 140 aa11.92□□□□□ -0.5
LIG1-215ENST00000597901 TGIF2LXQ8IUE1 241 aa11.92□□□□□ -0.5
LIG1-215ENST00000597901 IZUMO1Q8IYV9 350 aa11.92□□□□□ -0.5
LIG1-215ENST00000597901 CHPT1Q8WUD6 406 aa11.92□□□□□ -0.5
LIG1-215ENST00000597901 TM2D1Q9BX74 207 aa11.92□□□□□ -0.5
LIG1-215ENST00000597901 CCDC90BQ9GZT6 254 aa11.92□□□□□ -0.5
LIG1-215ENST00000597901 LINC00527Q9UJ94 153 aa11.92□□□□□ -0.5
LIG1-215ENST00000597901 TMEM14DPA8MWL7 114 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 MOSP00540 346 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 PRB2P02812 416 aaPredicted RBP11.91□□□□□ -0.5
LIG1-215ENST00000597901 CPEP16870 476 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 CD33P20138 364 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 MAP2K4P45985 399 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 RPS25P62851 125 aaKnown RBP11.91□□□□□ -0.5
LIG1-215ENST00000597901 HTD2P86397 168 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 MLLT11Q13015 90 aaPredicted RBP11.91□□□□□ -0.5
LIG1-215ENST00000597901 UNC119Q13432 240 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 TRAM1Q15629 374 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 PRSS48Q7RTY5 328 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 SLC35E3Q7Z769 313 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 OR6M1Q8NGM8 313 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 RBMXL1Q96E39 390 aaKnown RBP11.91□□□□□ -0.5
LIG1-215ENST00000597901 GFI1Q99684 422 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 MGLLQ99685 303 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 NICN1Q9BSH3 213 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 TMEM59Q9BXS4 323 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 VCX3BQ9H321 246 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 KCNK15Q9H427 330 aa11.91□□□□□ -0.5
LIG1-215ENST00000597901 AK6Q9Y3D8 172 aaKnown RBP11.91□□□□□ -0.5
LIG1-215ENST00000597901 TXNL1O43396 289 aa11.9□□□□□ -0.5
LIG1-215ENST00000597901 YPEL1O60688 119 aa11.9□□□□□ -0.5
LIG1-215ENST00000597901 BPNT1O95861 308 aa11.9□□□□□ -0.5
LIG1-215ENST00000597901 BLVRBP30043 206 aaPredicted RBP11.9□□□□□ -0.5
LIG1-215ENST00000597901 GNMTQ14749 295 aa11.9□□□□□ -0.5
LIG1-215ENST00000597901 Q8N9W7 124 aa11.9□□□□□ -0.5
LIG1-215ENST00000597901 GALMQ96C23 342 aa11.9□□□□□ -0.5
LIG1-215ENST00000597901 YPEL2Q96QA6 119 aa11.9□□□□□ -0.5
LIG1-215ENST00000597901 S1PR3Q99500 378 aa11.9□□□□□ -0.5
LIG1-215ENST00000597901 ABCG5Q9H222 651 aa11.9□□□□□ -0.5
LIG1-215ENST00000597901 LIN7CQ9NUP9 197 aaKnown RBP11.9□□□□□ -0.5
LIG1-215ENST00000597901 JPT1Q9UK76 154 aa11.9□□□□□ -0.5
LIG1-215ENST00000597901 A0A0A6YYD4 124 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 SOCS1O15524 211 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 LANCL1O43813 399 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 ARL6IP5O75915 188 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 IGLL1P15814 213 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 PSMA1P25786 263 aaKnown RBP11.89□□□□□ -0.51
LIG1-215ENST00000597901 PPP1CCP36873 323 aaKnown RBP11.89□□□□□ -0.51
LIG1-215ENST00000597901 F2RL1P55085 397 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 P2RY14Q15391 338 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 KHDC1LQ5JSQ8 128 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 LY6G6FQ5SQ64 297 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 IZUMO2Q6UXV1 221 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 FOXRED2Q8IWF2 684 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 ODF3L1Q8IXM7 274 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 STPG2Q8N412 459 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 FAM89BQ8N5H3 189 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 OR8H1Q8NGG4 311 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 RASL11BQ9BPW5 248 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 LPAR5Q9H1C0 372 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 PLGRKTQ9HBL7 147 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 ZFP57Q9NU63 452 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 PLEKHJ1Q9NW61 149 aa11.89□□□□□ -0.51
LIG1-215ENST00000597901 ERICH4A6NGS2 130 aa11.88□□□□□ -0.51
LIG1-215ENST00000597901 SLC17A2O00624 439 aa11.88□□□□□ -0.51
LIG1-215ENST00000597901 RGS11O94810 467 aa11.88□□□□□ -0.51
LIG1-215ENST00000597901 NAPSAO96009 420 aa11.88□□□□□ -0.51
LIG1-215ENST00000597901 PF4P02776 101 aa11.88□□□□□ -0.51
LIG1-215ENST00000597901 ARSBP15848 533 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms