RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 DNAH7Q8WXX0 4024 aa9.46□□□□□ -0.9
SOX2-OT-228ENST00000597828 DYNC2H1Q8NCM8 4307 aaKnown RBP9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 TRBV5-5A0A0J9YX44 114 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 A0A1W2PPK0 400 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 SEC14L6B5MCN3 397 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 ORC5O43913 435 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 GZMHP20718 246 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 CRHBPP24387 322 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 CNTFRP26992 372 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 CD1BP29016 333 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 ECI1P42126 302 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 RPS11P62280 158 aaKnown RBP eCLIP9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 FOXE3Q13461 319 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 DOC2BQ14184 412 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 GNMTQ14749 295 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 CCDC58Q4VC31 144 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 CT45A1Q5HYN5 189 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 SYT6Q5T7P8 510 aaPredicted RBP9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 LCE2DQ5TA82 110 aaPredicted RBP9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 SLC25A48Q6ZT89 311 aaKnown RBP9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 LINC00596Q86U02 117 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 RNF152Q8N8N0 203 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 ZNF485Q8NCK3 441 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 OR5M8Q8NGP6 311 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 OR8U1Q8NH10 309 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 CT45A3Q8NHU0 189 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 S100A13Q99584 98 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 ASCL2Q99929 193 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 RASL11BQ9BPW5 248 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 MND1Q9BWT6 205 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 BANF2Q9H503 90 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 GNG12Q9UBI6 72 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 SCOCQ9UIL1 159 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 TRAPPC2LQ9UL33 140 aa9.45□□□□□ -0.9
SOX2-OT-228ENST00000597828 TENM3Q9P273 2699 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 PNMA8CA0A1B0GUJ8 204 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 OGG1O15527 345 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 MRPS14O60783 128 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 HBZP02008 142 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 ELANEP08246 267 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 GTF2F2P13984 249 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 RCC1P18754 421 aaPredicted RBP9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 VDAC1P21796 283 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 IL3RAP26951 378 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 CDX1P47902 265 aaPredicted RBP9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 ZNF137PP52743 207 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 TAS2R43P59537 309 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 LSAMPQ13449 338 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 FHL3Q13643 280 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 KIR2DS1Q14954 304 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 C9orf66Q5T8R8 295 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 ASPHD1Q5U4P2 390 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 RNLSQ5VYX0 342 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 RAB12Q6IQ22 244 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 SVOPQ8N4V2 548 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 C8orf31Q8N9H6 132 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 C4orf3Q8WVX3 66 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 RITA1Q96K30 269 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 PGLYRP3Q96LB9 341 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 KCTD7Q96MP8 289 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 OR14A2Q96R54 314 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 DUSP21Q9H596 190 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 GNB4Q9HAV0 340 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 ETAA1Q9NY74 926 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 MRPS28Q9Y2Q9 187 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 U3KQK5 164 aa9.44□□□□□ -0.9
SOX2-OT-228ENST00000597828 UBE2QL1A1L167 161 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 G3V318 75 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 RAMP3O60896 148 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 IGHG4P01861 327 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 PSMB8P28062 276 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 SOX6P35712 828 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 WNT4P56705 351 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 GABARAPL2P60520 117 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 DCTN2Q13561 401 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 MED22Q15528 200 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 DMKNQ6E0U4 476 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 AWAT2Q6E213 333 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 SIGIRRQ6IA17 410 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 GLIPR1L1Q6UWM5 242 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 PRSS48Q7RTY5 328 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 JAGN1Q8N5M9 183 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 NANOGP1Q8N7R0 232 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 OR11H1Q8NG94 326 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 GHSRQ92847 366 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 OR5B12Q96R08 314 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 KLK15Q9H2R5 256 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 VCX3AQ9NNX9 186 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 PAK1IP1Q9NWT1 392 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 ZNF107Q9UII5 783 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 WSB1Q9Y6I7 421 aa9.43□□□□□ -0.9
SOX2-OT-228ENST00000597828 TRBV5-7A0A0A0MS05 114 aa9.42□□□□□ -0.9
SOX2-OT-228ENST00000597828 MCRIP1C9JLW8 97 aa9.42□□□□□ -0.9
SOX2-OT-228ENST00000597828 ATP6V0E1O15342 81 aa9.42□□□□□ -0.9
SOX2-OT-228ENST00000597828 SPINT2O43291 252 aa9.42□□□□□ -0.9
SOX2-OT-228ENST00000597828 TXNL1O43396 289 aa9.42□□□□□ -0.9
SOX2-OT-228ENST00000597828 ZNF780AO75290 641 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-228ENST00000597828 TNFAIP8O95379 198 aa9.42□□□□□ -0.9
SOX2-OT-228ENST00000597828 MAS1P04201 325 aa9.42□□□□□ -0.9
SOX2-OT-228ENST00000597828 HSMCR30P0CW71 290 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms