RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 ZNF735P0CB33 412 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 CCL3L1P16619 93 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 SSTR5P35346 364 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 HRH1P35367 487 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 GLP1RP43220 463 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 TAS2R19P59542 299 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 ACTBP60709 375 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 HLA-DRB3P79483 266 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 LCN2P80188 198 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 DYRK1AQ13627 763 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 C11orf91Q3C1V1 193 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 UTF1Q5T230 341 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 C6orf183Q5T699 404 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 CD276Q5ZPR3 534 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 TRIQKQ629K1 86 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 ZNF57Q68EA5 555 aaPredicted RBP7.73□□□□□ -1.17
TRIM28-208ENST00000597172 FAM53AQ6NSI3 398 aaPredicted RBP7.73□□□□□ -1.17
TRIM28-208ENST00000597172 STEAP1BQ6NZ63 245 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 C16orf87Q6PH81 154 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 MOB1BQ7L9L4 216 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 OVCH2Q7RTZ1 564 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 ZNF554Q86TJ5 538 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 FAM185AQ8N0U4 392 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 OR5AP2Q8NGF4 316 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 ZNF418Q8TF45 676 aaPredicted RBP7.73□□□□□ -1.17
TRIM28-208ENST00000597172 ARL11Q969Q4 196 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 RAB39BQ96DA2 213 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 TINAGL1Q9GZM7 467 aaPredicted RBP7.73□□□□□ -1.17
TRIM28-208ENST00000597172 HRASLSQ9HDD0 168 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 MMP26Q9NRE1 261 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 TAS2R8Q9NYW2 309 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 TAS2R3Q9NYW6 316 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 CALYQ9NYX4 217 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 KCNIP1Q9NZI2 227 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 OPN4Q9UHM6 478 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 MGAT4AQ9UM21 535 aa7.73□□□□□ -1.17
TRIM28-208ENST00000597172 UBE2J1Q9Y385 318 aaPredicted RBP7.73□□□□□ -1.17
TRIM28-208ENST00000597172 TRGV10A0A0A0MS01 117 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 PPIAL4CA0A0B4J2A2 164 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 KIR2DS1A0A191URI9 304 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 ZNF729A6NN14 1252 aaPredicted RBP7.72□□□□□ -1.17
TRIM28-208ENST00000597172 C17orf98A8MV24 154 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 F2RL2O00254 374 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 RAB3DO95716 219 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 AKAIN1P0CW23 69 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 ZNF728P0DKX0 622 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 PPIAL4GP0DN37 164 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 OMGP23515 440 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 KIR2DS4P43632 304 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 LOXL3P58215 753 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 DCTN2Q13561 401 aaKnown RBP7.72□□□□□ -1.17
TRIM28-208ENST00000597172 KIR2DS1Q14954 304 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 CDK10Q15131 360 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 ZNF660Q6AZW8 331 aaPredicted RBP7.72□□□□□ -1.17
TRIM28-208ENST00000597172 FAAP20Q6NZ36 180 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 TRAT1Q6PIZ9 186 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 PRR18Q8N4B5 295 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 OR4C16Q8NGL9 310 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 OR4A4PQ8NGN8 299 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 KIRREL1Q96J84 757 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 SLC6A7Q99884 636 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 CABLES2Q9BTV7 478 aa7.72□□□□□ -1.17
TRIM28-208ENST00000597172 C11orf54Q9H0W9 315 aaPredicted RBP7.72□□□□□ -1.17
TRIM28-208ENST00000597172 TRBV6-7A0A0A0MS04 114 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 SPINT2O43291 252 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 FOXH1O75593 365 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 OR5H8P0DN80 308 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 TBPP20226 339 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 BTCP35070 178 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 TAS2R46P59540 309 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 AP3S2P59780 193 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 ARF6P62330 175 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 HTD2P86397 168 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 FOXL1Q12952 345 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 ASAH1Q13510 395 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 VAX1Q5SQQ9 334 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 PRAMEF5Q5TYX0 476 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 DHRS11Q6UWP2 260 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 HEPN1Q6WQI6 88 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 Q8N7P7 452 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 OR52L2PQ8NGH6 319 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 OR5H2Q8NGV7 314 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 OR56B4Q8NH76 319 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 GIMAP1Q8WWP7 306 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 IL1F10Q8WWZ1 152 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 DMRTB1Q96MA1 342 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 ZNF714Q96N38 554 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 TMPRSS13Q9BYE2 586 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 TOLLIPQ9H0E2 274 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 LPAR2Q9HBW0 351 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 PALMDQ9NP74 551 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 NECAP2Q9NVZ3 263 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 IDI2-AS1Q9NZ38 188 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 OR1A1Q9P1Q5 309 aa7.71□□□□□ -1.18
TRIM28-208ENST00000597172 IGHV3-43A0A0B4J1X8 118 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 IGHV2-70DA0A0C4DH43 119 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 BET1O15155 118 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 LYRM1O43325 122 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 DIRAS3O95661 229 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 AMY2AP04746 511 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms