RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 NDPQ00604 133 aa7.69□□□□□ -1.18
LIG1-209ENST00000596104 GABPB1Q06547 395 aaPredicted RBP7.69□□□□□ -1.18
LIG1-209ENST00000596104 C5orf64Q2M2E5 130 aa7.69□□□□□ -1.18
LIG1-209ENST00000596104 ATAD3CQ5T2N8 411 aa7.69□□□□□ -1.18
LIG1-209ENST00000596104 SYT6Q5T7P8 510 aaPredicted RBP7.69□□□□□ -1.18
LIG1-209ENST00000596104 DDI2Q5TDH0 399 aa7.69□□□□□ -1.18
LIG1-209ENST00000596104 Q8N1Y9 231 aa7.69□□□□□ -1.18
LIG1-209ENST00000596104 OR1L1Q8NH94 360 aa7.69□□□□□ -1.18
LIG1-209ENST00000596104 ARPC1AQ92747 370 aa7.69□□□□□ -1.18
LIG1-209ENST00000596104 ANKRD60Q9BZ19 345 aa7.69□□□□□ -1.18
LIG1-209ENST00000596104 TMEM138Q9NPI0 162 aa7.69□□□□□ -1.18
LIG1-209ENST00000596104 CHCHD3Q9NX63 227 aaKnown RBP7.69□□□□□ -1.18
LIG1-209ENST00000596104 FBXO7Q9Y3I1 522 aa7.69□□□□□ -1.18
LIG1-209ENST00000596104 IGHV4OR15-8A0A075B7B6 117 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 A0A087WW49 117 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 SNTNA6NMZ2 147 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 LINC01619G3V211 115 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 SPINT2O43291 252 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 NDUFA3O95167 84 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 CD2P06729 351 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 IGHV4-30-4P0DP06 118 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 RCC1P18754 421 aaPredicted RBP7.68□□□□□ -1.18
LIG1-209ENST00000596104 CRIP2P52943 208 aaPredicted RBP7.68□□□□□ -1.18
LIG1-209ENST00000596104 GBX2P52951 348 aaPredicted RBP7.68□□□□□ -1.18
LIG1-209ENST00000596104 GNMTQ14749 295 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 XAF1Q6GPH4 301 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 ODF3L1Q8IXM7 274 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 STX19Q8N4C7 294 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 OR6Q1Q8NGQ2 317 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 OR4K15Q8NH41 348 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 GPR148Q8TDV2 347 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 NEK7Q8TDX7 302 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 TMEM106AQ96A25 262 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 ISOC1Q96CN7 298 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 CYYR1Q96J86 154 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 MYCBPQ99417 103 aaPredicted RBP7.68□□□□□ -1.18
LIG1-209ENST00000596104 NABP2Q9BQ15 211 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 MRPL20Q9BYC9 149 aaKnown RBP7.68□□□□□ -1.18
LIG1-209ENST00000596104 AMBNQ9NP70 447 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 RAB9BQ9NP90 201 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 C19orf73Q9NVV2 129 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 PAK1IP1Q9NWT1 392 aaPredicted RBP7.68□□□□□ -1.18
LIG1-209ENST00000596104 TRAPPC2LQ9UL33 140 aa7.68□□□□□ -1.18
LIG1-209ENST00000596104 A8MZ25 164 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 MCRIP1C9JLW8 97 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 EI24O14681 340 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 LDLRAD4O15165 306 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 NBR2O15453 112 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 ZNF780AO75290 641 aaPredicted RBP7.67□□□□□ -1.18
LIG1-209ENST00000596104 FADS2O95864 444 aaKnown RBP7.67□□□□□ -1.18
LIG1-209ENST00000596104 LGALS1P09382 135 aaKnown RBP7.67□□□□□ -1.18
LIG1-209ENST00000596104 OR8U9P0C7N5 309 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 LIMS3P0CW19 117 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 LIMS4P0CW20 117 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 GTF2F2P13984 249 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 IGFBP3P17936 291 aaPredicted RBP7.67□□□□□ -1.18
LIG1-209ENST00000596104 BDKRB2P30411 391 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 VEGFCP49767 419 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 PPP3R1P63098 170 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 SRSF7Q16629 238 aaKnown RBP eCLIP7.67□□□□□ -1.18
LIG1-209ENST00000596104 ZIK1Q3SY52 487 aaPredicted RBP7.67□□□□□ -1.18
LIG1-209ENST00000596104 SLC22A6Q4U2R8 563 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 MORN2Q502X0 79 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 C6orf183Q5T699 404 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 C1orf146Q5VVC0 180 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 LIN54Q6MZP7 749 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 ADAMTSL5Q6ZMM2 481 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 PRR18Q8N4B5 295 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 NPBQ8NG41 125 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 OR52I1Q8NGK6 324 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 CASTOR1Q8WTX7 329 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 ORAI1Q96D31 301 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 ZNF251Q9BRH9 671 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 GHITMQ9H3K2 345 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 SPACA1Q9HBV2 294 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 MBNL3Q9NUK0 354 aaKnown RBP7.67□□□□□ -1.18
LIG1-209ENST00000596104 MRPS18AQ9NVS2 196 aaKnown RBP7.67□□□□□ -1.18
LIG1-209ENST00000596104 ETAA1Q9NY74 926 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 FOXA2Q9Y261 457 aaPredicted RBP7.67□□□□□ -1.18
LIG1-209ENST00000596104 MRPS28Q9Y2Q9 187 aaKnown RBP7.67□□□□□ -1.18
LIG1-209ENST00000596104 GMPPBQ9Y5P6 360 aa7.67□□□□□ -1.18
LIG1-209ENST00000596104 STARD9Q9P2P6 4700 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 A0A1W2PN81 502 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 SC5DO75845 299 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 EGR2P11161 476 aaPredicted RBP7.66□□□□□ -1.18
LIG1-209ENST00000596104 CHRNA7P36544 502 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 CX3CL1P78423 397 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 RAB40BQ12829 278 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 ECSCRQ19T08 205 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 ZNF660Q6AZW8 331 aaPredicted RBP7.66□□□□□ -1.18
LIG1-209ENST00000596104 RAB12Q6IQ22 244 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 RPL22L1Q6P5R6 122 aaKnown RBP7.66□□□□□ -1.18
LIG1-209ENST00000596104 TRAT1Q6PIZ9 186 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 ZNF833PQ6ZTB9 187 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 C5orf24Q7Z6I8 188 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 HAPLN4Q86UW8 402 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 LYPD6Q86Y78 171 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 OR52L2PQ8NGH6 319 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 RHOXF1Q8NHV9 184 aa7.66□□□□□ -1.18
LIG1-209ENST00000596104 MRPS24Q96EL2 167 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms