RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-205	ENST00000595081	ZNF260	Q3ZCT1	412 aa		18.51	■□□□□ 0.55
PNKP-205	ENST00000595081	DTX3	Q8N9I9	347 aa		18.51	■□□□□ 0.55
PNKP-205	ENST00000595081	IL1F10	Q8WWZ1	152 aa		18.51	■□□□□ 0.55
PNKP-205	ENST00000595081	GALM	Q96C23	342 aa		18.51	■□□□□ 0.55
PNKP-205	ENST00000595081	BCL7B	Q9BQE9	202 aa		18.51	■□□□□ 0.55
PNKP-205	ENST00000595081	CHIA	Q9BZP6	476 aa		18.51	■□□□□ 0.55
PNKP-205	ENST00000595081	ABCG5	Q9H222	651 aa		18.51	■□□□□ 0.55
PNKP-205	ENST00000595081	ZNF230	Q9UIE0	474 aa	Predicted RBP	18.51	■□□□□ 0.55
PNKP-205	ENST00000595081		H3BMQ9	156 aa		18.5	■□□□□ 0.55
PNKP-205	ENST00000595081	SLC31A2	O15432	143 aa		18.5	■□□□□ 0.55
PNKP-205	ENST00000595081	GSTP1	P09211	210 aa	Known RBP	18.5	■□□□□ 0.55
PNKP-205	ENST00000595081	PPP1CC	P36873	323 aa	Known RBP	18.5	■□□□□ 0.55
PNKP-205	ENST00000595081	LRRC75B	Q2VPJ9	315 aa		18.5	■□□□□ 0.55
PNKP-205	ENST00000595081	HACD4	Q5VWC8	232 aa		18.5	■□□□□ 0.55
PNKP-205	ENST00000595081	NUDCD2	Q8WVJ2	157 aa		18.5	■□□□□ 0.55
PNKP-205	ENST00000595081	MAFIP	Q8WZ33	124 aa		18.5	■□□□□ 0.55
PNKP-205	ENST00000595081	SSX3	Q99909	188 aa		18.5	■□□□□ 0.55
PNKP-205	ENST00000595081	DPAGT1	Q9H3H5	408 aa		18.5	■□□□□ 0.55
PNKP-205	ENST00000595081	DIABLO	Q9NR28	239 aa		18.5	■□□□□ 0.55
PNKP-205	ENST00000595081	POMT1	Q9Y6A1	747 aa		18.5	■□□□□ 0.55
PNKP-205	ENST00000595081		A0A0A6YYH2	397 aa		18.49	■□□□□ 0.55
PNKP-205	ENST00000595081		A6NJ64	397 aa		18.49	■□□□□ 0.55
PNKP-205	ENST00000595081	LEUTX	A8MZ59	168 aa		18.49	■□□□□ 0.55
PNKP-205	ENST00000595081		H3BUX3	64 aa		18.49	■□□□□ 0.55
PNKP-205	ENST00000595081	EIF4E	P06730	217 aa	Known RBP	18.49	■□□□□ 0.55
PNKP-205	ENST00000595081	RNASE1	P07998	156 aa	Known RBP	18.49	■□□□□ 0.55
PNKP-205	ENST00000595081	SCT	P09683	121 aa		18.49	■□□□□ 0.55
PNKP-205	ENST00000595081	ZNF182	P17025	639 aa	Predicted RBP	18.49	■□□□□ 0.55
PNKP-205	ENST00000595081	TALDO1	P37837	337 aa		18.49	■□□□□ 0.55
PNKP-205	ENST00000595081	HTD2	P86397	168 aa		18.49	■□□□□ 0.55
PNKP-205	ENST00000595081	TMEM86B	Q8N661	226 aa		18.49	■□□□□ 0.55
PNKP-205	ENST00000595081	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	18.49	■□□□□ 0.55
PNKP-205	ENST00000595081	ZNF439	Q8NDP4	499 aa		18.49	■□□□□ 0.55
PNKP-205	ENST00000595081	OR10X1	Q8NGY0	326 aa		18.49	■□□□□ 0.55
PNKP-205	ENST00000595081	ACOT12	Q8WYK0	555 aa		18.49	■□□□□ 0.55
PNKP-205	ENST00000595081	JPT1	Q9UK76	154 aa		18.49	■□□□□ 0.55
PNKP-205	ENST00000595081	MGAT4A	Q9UM21	535 aa		18.49	■□□□□ 0.55
PNKP-205	ENST00000595081	POM121C	A8CG34	1229 aa		18.48	■□□□□ 0.55
PNKP-205	ENST00000595081	RNF212B	A8MTL3	300 aa		18.48	■□□□□ 0.55
PNKP-205	ENST00000595081	TRDC	B7Z8K6	153 aa		18.48	■□□□□ 0.55
PNKP-205	ENST00000595081	LY6L	H3BQJ8	138 aa		18.48	■□□□□ 0.55
PNKP-205	ENST00000595081	RAB13	P51153	203 aa		18.48	■□□□□ 0.55
PNKP-205	ENST00000595081	MORN2	Q502X0	79 aa		18.48	■□□□□ 0.55
PNKP-205	ENST00000595081	TPTE2P1	Q5T6R2	138 aa		18.48	■□□□□ 0.55
PNKP-205	ENST00000595081	FAM216A	Q8WUB2	273 aa		18.48	■□□□□ 0.55
PNKP-205	ENST00000595081	S100A16	Q96FQ6	103 aa	Known RBP	18.48	■□□□□ 0.55
PNKP-205	ENST00000595081	MDFI	Q99750	246 aa		18.48	■□□□□ 0.55
PNKP-205	ENST00000595081	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	18.48	■□□□□ 0.55
PNKP-205	ENST00000595081	COL6A5	A8TX70	2615 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	BTBD17	A6NE02	478 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	CCDC160	A6NGH7	325 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	SSX5	O60225	188 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	HPGDS	O60760	199 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	PTHLH	P12272	177 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	CEACAM3	P40198	252 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	ZNF134	P52741	427 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	GNG2	P59768	71 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	CT45A1	Q5HYN5	189 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	C8orf31	Q8N9H6	132 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	CT45A3	Q8NHU0	189 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	PIFO	Q8TCI5	191 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	ZFAND2B	Q8WV99	257 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	TMEM158	Q8WZ71	300 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	AP3S1	Q92572	193 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	CREB3L1	Q96BA8	519 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	C19orf24	Q9BVV8	132 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	AUNIP	Q9H7T9	357 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	OR1A1	Q9P1Q5	309 aa		18.47	■□□□□ 0.55
PNKP-205	ENST00000595081	IGKV1-6	A0A0C4DH72	117 aa		18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	VGLL3	A8MV65	326 aa		18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	XRCC3	O43542	346 aa		18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	MADCAM1	Q13477	382 aa		18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	DIAPH2-AS1	Q14236	149 aa		18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	LY6E	Q16553	131 aa		18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	AANAT	Q16613	207 aa		18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	PNLIPRP3	Q17RR3	467 aa		18.46	■□□□□ 0.55
PNKP-205	ENST00000595081		Q3ZCU0	254 aa		18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	STEAP3	Q658P3	488 aa		18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	C16orf87	Q6PH81	154 aa		18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	SLC25A48	Q6ZT89	311 aa	Known RBP	18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	LINC00311	Q8N616	119 aa		18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	DYNC2LI1	Q8TCX1	351 aa		18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	TAF15	Q92804	592 aa	Known RBP eCLIP	18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	RBM38	Q9H0Z9	239 aa	Known RBP	18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	SLC23A1	Q9UHI7	598 aa		18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	VPREB3	Q9UKI3	123 aa		18.46	■□□□□ 0.55
PNKP-205	ENST00000595081	IGKV1D-8	A0A087WSZ0	117 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	FABP7	O15540	132 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	YPEL1	O60688	119 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	APOA1	P02647	267 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	GSTT2	P0CG29	244 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	GSTT2B	P0CG30	244 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	ELK1	P19419	428 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	DTYMK	P23919	212 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	SOX6	P35712	828 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	HERPUD1	Q15011	391 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	TMEM69	Q5SWH9	247 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	MZT2A	Q6P582	158 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	OR5R1	Q8NH85	324 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	TOMM40L	Q969M1	308 aa		18.45	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms