RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 OR4F4Q96R69 305 aa14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 YTHDF1Q9BYJ9 559 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 OR2S2Q9NQN1 319 aa14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 MGAT4AQ9UM21 535 aa14.15□□□□□ -0.14
SHKBP1-204ENST00000594862 IGHV3-43A0A0B4J1X8 118 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 A0A1W2PPE3 182 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 DENRO43583 198 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 IGKV1D-33P01593 117 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 IGKV1-33P01594 117 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 OPN1MWP04001 364 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 OPN1MW2P0DN77 364 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 OPN1MW3P0DN78 364 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 IGHV3-43DP0DP04 118 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 MYL9P24844 172 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 BLVRBP30043 206 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 QRFPP83859 136 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 EBI3Q14213 229 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 OR10K2Q6IF99 312 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 CENPVQ7Z7K6 275 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 TGIF2LXQ8IUE1 241 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 ZNF439Q8NDP4 499 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 OR4X2Q8NGF9 303 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 OR2T10Q8NGZ9 312 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 OR1L1Q8NH94 360 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 UBALD1Q8TB05 177 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 RTN4IP1Q8WWV3 396 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 ST6GALNAC6Q969X2 333 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 SULT4A1Q9BR01 284 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 CHMP1AQ9HD42 196 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 PLEKHJ1Q9NW61 149 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 HSF4Q9ULV5 492 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 AK6Q9Y3D8 172 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 V9GY05 133 aa14.14□□□□□ -0.15
SHKBP1-204ENST00000594862 TRAV1-2A0A0B4J238 106 aa14.13□□□□□ -0.15
SHKBP1-204ENST00000594862 CD28P10747 220 aa14.13□□□□□ -0.15
SHKBP1-204ENST00000594862 CD1BP29016 333 aa14.13□□□□□ -0.15
SHKBP1-204ENST00000594862 HMGN3Q15651 99 aa14.13□□□□□ -0.15
SHKBP1-204ENST00000594862 CD200R1LQ6Q8B3 271 aa14.13□□□□□ -0.15
SHKBP1-204ENST00000594862 Q6ZS46 218 aa14.13□□□□□ -0.15
SHKBP1-204ENST00000594862 C6orf201Q7Z4U5 140 aa14.13□□□□□ -0.15
SHKBP1-204ENST00000594862 OR8H1Q8NGG4 311 aa14.13□□□□□ -0.15
SHKBP1-204ENST00000594862 FAM110DQ8TAY7 271 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-204ENST00000594862 LPAR5Q9H1C0 372 aa14.13□□□□□ -0.15
SHKBP1-204ENST00000594862 STEAP1Q9UHE8 339 aa14.13□□□□□ -0.15
SHKBP1-204ENST00000594862 CMYA5Q8N3K9 4069 aa14.13□□□□□ -0.15
SHKBP1-204ENST00000594862 TRDV1A0A1B0GX56 115 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 LANCL1O43813 399 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 YPEL1O60688 119 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 NAPSAO96009 420 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 AMY1AP04745 511 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 AMY2AP04746 511 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 DIAPH2-AS1Q14236 149 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 P2RY14Q15391 338 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 TMEM95Q3KNT9 176 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 MORN2Q502X0 79 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 C9orf152Q5JTZ5 239 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 UBE2UQ5VVX9 321 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 FAM89BQ8N5H3 189 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 C5orf56Q8N8D9 126 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 OR5AU1Q8NGC0 362 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 OR56B1Q8NGI3 324 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 OR10V1Q8NGI7 309 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 FAM3DQ96BQ1 224 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 YPEL2Q96QA6 119 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 GFI1Q99684 422 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 NICN1Q9BSH3 213 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 FAAP24Q9BTP7 215 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 ABHD14AQ9BUJ0 271 aa14.12□□□□□ -0.15
SHKBP1-204ENST00000594862 TRBV6-6A0A0A6YYG2 114 aa14.11□□□□□ -0.15
SHKBP1-204ENST00000594862 REG1BP48304 166 aa14.11□□□□□ -0.15
SHKBP1-204ENST00000594862 SSX1Q16384 188 aa14.11□□□□□ -0.15
SHKBP1-204ENST00000594862 CT45A1Q5HYN5 189 aa14.11□□□□□ -0.15
SHKBP1-204ENST00000594862 CT45A3Q8NHU0 189 aa14.11□□□□□ -0.15
SHKBP1-204ENST00000594862 CITED2Q99967 270 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-204ENST00000594862 C12orf4Q9NQ89 552 aa14.11□□□□□ -0.15
SHKBP1-204ENST00000594862 WNK1Q9H4A3 2382 aa14.11□□□□□ -0.15
SHKBP1-204ENST00000594862 VWFP04275 2813 aa14.1□□□□□ -0.15
SHKBP1-204ENST00000594862 MOSP00540 346 aa14.1□□□□□ -0.15
SHKBP1-204ENST00000594862 CD83Q01151 205 aa14.1□□□□□ -0.15
SHKBP1-204ENST00000594862 HNF4GQ14541 408 aa14.1□□□□□ -0.15
SHKBP1-204ENST00000594862 NSUN5P1Q3KNT7 163 aa14.1□□□□□ -0.15
SHKBP1-204ENST00000594862 ZNF880Q6PDB4 577 aa14.1□□□□□ -0.15
SHKBP1-204ENST00000594862 FOXRED2Q8IWF2 684 aa14.1□□□□□ -0.15
SHKBP1-204ENST00000594862 LYG1Q8N1E2 194 aa14.1□□□□□ -0.15
SHKBP1-204ENST00000594862 OR2AK2Q8NG84 335 aa14.1□□□□□ -0.15
SHKBP1-204ENST00000594862 OR51D1Q8NGF3 324 aa14.1□□□□□ -0.15
SHKBP1-204ENST00000594862 CHPT1Q8WUD6 406 aa14.1□□□□□ -0.15
SHKBP1-204ENST00000594862 EAF1Q96JC9 268 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-204ENST00000594862 GHITMQ9H3K2 345 aa14.1□□□□□ -0.15
SHKBP1-204ENST00000594862 KCNK15Q9H427 330 aa14.1□□□□□ -0.15
SHKBP1-204ENST00000594862 LIN7CQ9NUP9 197 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-204ENST00000594862 SLC31A2O15432 143 aa14.09□□□□□ -0.15
SHKBP1-204ENST00000594862 ZNF134P52741 427 aa14.09□□□□□ -0.15
SHKBP1-204ENST00000594862 MRPS15P82914 257 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-204ENST00000594862 FBLN7Q53RD9 439 aa14.09□□□□□ -0.15
SHKBP1-204ENST00000594862 FAM71F2Q6NXP2 309 aa14.09□□□□□ -0.15
SHKBP1-204ENST00000594862 SPARTQ8N0X7 666 aa14.09□□□□□ -0.15
SHKBP1-204ENST00000594862 COMMD1Q8N668 190 aa14.09□□□□□ -0.15
SHKBP1-204ENST00000594862 Q8N6K4 173 aa14.09□□□□□ -0.15
SHKBP1-204ENST00000594862 SETD6Q8TBK2 473 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms