RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 RAB9BQ9NP90 201 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 PLEKHJ1Q9NW61 149 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 IDI2-AS1Q9NZ38 188 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 PITPNC1Q9UKF7 332 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 TRAPPC2LQ9UL33 140 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 HSF4Q9ULV5 492 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 TGP01266 2768 aa9.99□□□□□ -0.81
UPF1-203ENST00000594504 SH2D7A6NKC9 451 aaPredicted RBP9.98□□□□□ -0.81
UPF1-203ENST00000594504 FOXI3A8MTJ6 420 aaPredicted RBP9.98□□□□□ -0.81
UPF1-203ENST00000594504 SOCS1O15524 211 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 SLC2A2P11168 524 aaPredicted RBP9.98□□□□□ -0.81
UPF1-203ENST00000594504 NFYBP25208 207 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 VDAC2P45880 294 aaPredicted RBP9.98□□□□□ -0.81
UPF1-203ENST00000594504 VEGFCP49767 419 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 DYNLT3P51808 116 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 LOXL3P58215 753 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 MXD1Q05195 221 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 MINOS1Q5TGZ0 78 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 C10orf99Q6UWK7 81 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 SLC16A12Q6ZSM3 486 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 ZNF554Q86TJ5 538 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 OR4F17Q8NGA8 305 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 OR4P4Q8NGL7 312 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 OR13F1Q8NGS4 319 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 OR4K15Q8NH41 348 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 RFESDQ8TAC1 157 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 ZNF596Q8TC21 504 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 ARL11Q969Q4 196 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 OR4F4Q96R69 305 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 FAAP24Q9BTP7 215 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 ZNF286AQ9HBT8 521 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 NECAP2Q9NVZ3 263 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 DAPK2Q9UIK4 370 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 MINOS1-NBL1R4GNA1 71 aa9.98□□□□□ -0.81
UPF1-203ENST00000594504 A0A0B4J203 849 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 METTL21EPA6NDL7 271 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 C15orf65H3BRN8 121 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 SPINT2O43291 252 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 IGLV1-47P01700 117 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 CLEC2LP0C7M8 214 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 HTR1DP28221 377 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 PRRX1P54821 245 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 TMEM50BP56557 158 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 SCAND1P57086 179 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 CD83Q01151 205 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 PLA2G7Q13093 441 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 TMEM30BQ3MIR4 351 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 TCTEX1D4Q5JR98 221 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 UTF1Q5T230 341 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 REC114Q7Z4M0 266 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 OR52M1Q8NGK5 317 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 MRPL30Q8TCC3 161 aaKnown RBP9.97□□□□□ -0.81
UPF1-203ENST00000594504 CREB3L1Q96BA8 519 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 FUNDC2Q9BWH2 189 aa9.97□□□□□ -0.81
UPF1-203ENST00000594504 RIMS4Q9H426 269 aaPredicted RBP9.97□□□□□ -0.81
UPF1-203ENST00000594504 MBNL3Q9NUK0 354 aaKnown RBP9.97□□□□□ -0.81
UPF1-203ENST00000594504 C12orf77C9JDV5 145 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 TOR1AO14656 332 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 TMEM127O75204 238 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 NAPSAO96009 420 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 RCC1P18754 421 aaPredicted RBP9.96□□□□□ -0.82
UPF1-203ENST00000594504 CD33P20138 364 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 LTC4SQ16873 150 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 HLA-DRB5Q30154 266 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 MOB1BQ7L9L4 216 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 CENPVQ7Z7K6 275 aaPredicted RBP9.96□□□□□ -0.82
UPF1-203ENST00000594504 CROCCP3Q8IVE0 287 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 OR9G1Q8NH87 305 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 RAB3CQ96E17 227 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 ARHGAP5-AS1Q96IT6 56 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 CYYR1Q96J86 154 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 PECRQ9BY49 303 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 CHMP1AQ9HD42 196 aaPredicted RBP9.96□□□□□ -0.82
UPF1-203ENST00000594504 KCNIP1Q9NZI2 227 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 DPM3Q9P2X0 92 aa9.96□□□□□ -0.82
UPF1-203ENST00000594504 TRBV6-6A0A0A6YYG2 114 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 TCRBV4S1A1TA0A5B7 111 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 LEUTXA8MZ59 168 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 RAB27BO00194 218 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 SDCBPO00560 298 aaPredicted RBP9.95□□□□□ -0.82
UPF1-203ENST00000594504 HBZP02008 142 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 LPLP06858 475 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 SNRPBP14678 240 aaKnown RBP9.95□□□□□ -0.82
UPF1-203ENST00000594504 CEACAM3P40198 252 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 LSM3P62310 102 aaKnown RBP9.95□□□□□ -0.82
UPF1-203ENST00000594504 Q3ZCU0 254 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 ABCA11PQ4W5N1 156 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 PLAC9Q5JTB6 97 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 IDNKQ5T6J7 187 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 WFDC9Q8NEX5 89 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 OR10R2Q8NGX6 335 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 UBALD1Q8TB05 177 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 LGALS14Q8TCE9 139 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 TAF9BQ9HBM6 251 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 C12orf4Q9NQ89 552 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 GFOD1Q9NXC2 390 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 AK3Q9UIJ7 227 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 PSG11Q9UQ72 335 aa9.95□□□□□ -0.82
UPF1-203ENST00000594504 AMMECR1Q9Y4X0 333 aaPredicted RBP9.95□□□□□ -0.82
UPF1-203ENST00000594504 ETV7Q9Y603 341 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms