RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 OR10V1Q8NGI7 309 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 LINC01006Q8NI28 216 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 PTX4Q96A99 478 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 ZNF747Q9BV97 191 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 RIMS4Q9H426 269 aaPredicted RBP11.7□□□□□ -0.54
VRK3-206ENST00000594090 C16orf95Q9H693 158 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 GNG12Q9UBI6 72 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 JPT1Q9UK76 154 aa11.7□□□□□ -0.54
VRK3-206ENST00000594090 ANK2Q01484 3957 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 SLC31A2O15432 143 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 AIREO43918 545 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 CLEC2LP0C7M8 214 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 BRS3P32247 399 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 MNDAP41218 407 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 HTD2P86397 168 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 DIAPH2-AS1Q14236 149 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 GNMTQ14749 295 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 OR10R2Q8NGX6 335 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 SETD6Q8TBK2 473 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 WFDC12Q8WWY7 111 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 RAB3CQ96E17 227 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 CMSS1Q9BQ75 279 aaKnown RBP11.69□□□□□ -0.54
VRK3-206ENST00000594090 OCSTAMPQ9BR26 566 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 RANBP3Q9H6Z4 567 aaPredicted RBP11.69□□□□□ -0.54
VRK3-206ENST00000594090 C12orf4Q9NQ89 552 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 OR2S2Q9NQN1 319 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 KCNK7Q9Y2U2 307 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 RNF114Q9Y508 228 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 A0A1W2PPI3 338 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 METTL21EPA6NDL7 271 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 RAB27BO00194 218 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 MFNGO00587 321 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 SNRPBP14678 240 aaKnown RBP11.69□□□□□ -0.54
VRK3-206ENST00000594090 CD24P25063 80 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 TGFBR1P36897 503 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 RAB7AP51149 207 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 MORN2Q502X0 79 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 SLC25A48Q6ZT89 311 aaKnown RBP11.69□□□□□ -0.54
VRK3-206ENST00000594090 OR8H3Q8N146 312 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 OR52L2PQ8NGH6 319 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 OR4C13Q8NGP0 309 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 LGALS14Q8TCE9 139 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 GALMQ96C23 342 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 NPFFR1Q9GZQ6 430 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 ABRACLQ9P1F3 81 aa11.69□□□□□ -0.54
VRK3-206ENST00000594090 HSD17B6O14756 317 aa11.68□□□□□ -0.54
VRK3-206ENST00000594090 TIMM23O14925 209 aa11.68□□□□□ -0.54
VRK3-206ENST00000594090 HIST1H1DP16402 221 aaKnown RBP11.68□□□□□ -0.54
VRK3-206ENST00000594090 GNB3P16520 340 aa11.68□□□□□ -0.54
VRK3-206ENST00000594090 PPP1CCP36873 323 aaKnown RBP11.68□□□□□ -0.54
VRK3-206ENST00000594090 SCAND1P57086 179 aa11.68□□□□□ -0.54
VRK3-206ENST00000594090 HLA-DRB3P79483 266 aa11.68□□□□□ -0.54
VRK3-206ENST00000594090 ZNF816Q0VGE8 651 aaPredicted RBP11.68□□□□□ -0.54
VRK3-206ENST00000594090 FBLN7Q53RD9 439 aa11.68□□□□□ -0.54
VRK3-206ENST00000594090 CT45A1Q5HYN5 189 aa11.68□□□□□ -0.54
VRK3-206ENST00000594090 CT45A3Q8NHU0 189 aa11.68□□□□□ -0.54
VRK3-206ENST00000594090 CFHR4Q92496 578 aa11.68□□□□□ -0.54
VRK3-206ENST00000594090 ATG5Q9H1Y0 275 aa11.68□□□□□ -0.54
VRK3-206ENST00000594090 Q9N2K0 584 aa11.68□□□□□ -0.54
VRK3-206ENST00000594090 MGAT4AQ9UM21 535 aa11.68□□□□□ -0.54
VRK3-206ENST00000594090 STAB1Q9NY15 2570 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 YPEL1O60688 119 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 CD3GP09693 182 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 IL3RAP26951 378 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 KIR2DS4P43632 304 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 ZNF134P52741 427 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 ZNF137PP52743 207 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 PROK1P58294 105 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 LSM3P62310 102 aaKnown RBP11.67□□□□□ -0.54
VRK3-206ENST00000594090 IDNKQ5T6J7 187 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 SHISA2Q6UWI4 295 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 DRAM1Q8N682 238 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 OR13F1Q8NGS4 319 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 OR56B4Q8NH76 319 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 CAPSLQ8WWF8 208 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 IL1F10Q8WWZ1 152 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 ST6GALNAC6Q969X2 333 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 YPEL2Q96QA6 119 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 ABHD14AQ9BUJ0 271 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 FUNDC2Q9BWH2 189 aa11.67□□□□□ -0.54
VRK3-206ENST00000594090 A0A075B6Q4 140 aa11.66□□□□□ -0.54
VRK3-206ENST00000594090 IGHV1-3A0A0C4DH29 117 aa11.66□□□□□ -0.54
VRK3-206ENST00000594090 FAM90A9PA6NNJ1 464 aa11.66□□□□□ -0.54
VRK3-206ENST00000594090 RGS11O94810 467 aa11.66□□□□□ -0.54
VRK3-206ENST00000594090 GAPDHP04406 335 aaKnown RBP11.66□□□□□ -0.54
VRK3-206ENST00000594090 REG1BP48304 166 aa11.66□□□□□ -0.54
VRK3-206ENST00000594090 MRPS15P82914 257 aaKnown RBP11.66□□□□□ -0.54
VRK3-206ENST00000594090 LY6G6FQ5SQ64 297 aa11.66□□□□□ -0.54
VRK3-206ENST00000594090 STEAP3Q658P3 488 aa11.66□□□□□ -0.54
VRK3-206ENST00000594090 C16orf82Q7Z2V1 217 aa11.66□□□□□ -0.54
VRK3-206ENST00000594090 RTN4IP1Q8WWV3 396 aaPredicted RBP11.66□□□□□ -0.54
VRK3-206ENST00000594090 SLC25A33Q9BSK2 321 aa11.66□□□□□ -0.54
VRK3-206ENST00000594090 ZNF702PQ9H963 129 aa11.66□□□□□ -0.54
VRK3-206ENST00000594090 SIGLEC9Q9Y336 463 aa11.66□□□□□ -0.54
VRK3-206ENST00000594090 ETV7Q9Y603 341 aa11.66□□□□□ -0.54
VRK3-206ENST00000594090 TENM1Q9UKZ4 2725 aa11.65□□□□□ -0.54
VRK3-206ENST00000594090 SERPINE3A8MV23 424 aa11.65□□□□□ -0.54
VRK3-206ENST00000594090 TMEM127O75204 238 aa11.65□□□□□ -0.54
VRK3-206ENST00000594090 SCGNO76038 276 aa11.65□□□□□ -0.54
VRK3-206ENST00000594090 SNRNP70P08621 437 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms