RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 KLF2Q9Y5W3 355 aaPredicted RBP11.05□□□□□ -0.64
VRK3-205ENST00000593919 TENM4Q6N022 2769 aa11.05□□□□□ -0.64
VRK3-205ENST00000593919 LRRC30A6NM36 301 aa11.05□□□□□ -0.64
VRK3-205ENST00000593919 DANCRP0C864 163 aa11.05□□□□□ -0.64
VRK3-205ENST00000593919 ZNF728P0DKX0 622 aa11.05□□□□□ -0.64
VRK3-205ENST00000593919 PRDX2P32119 198 aa11.05□□□□□ -0.64
VRK3-205ENST00000593919 GABRA2P47869 451 aa11.05□□□□□ -0.64
VRK3-205ENST00000593919 FAM74A1Q5RGS3 127 aa11.05□□□□□ -0.64
VRK3-205ENST00000593919 C11orf71Q6IPW1 123 aa11.05□□□□□ -0.64
VRK3-205ENST00000593919 C16orf54Q6UWD8 224 aa11.05□□□□□ -0.64
VRK3-205ENST00000593919 ZNF497Q6ZNH5 498 aa11.05□□□□□ -0.64
VRK3-205ENST00000593919 CCL17Q92583 94 aa11.05□□□□□ -0.64
VRK3-205ENST00000593919 RBPMSQ93062 196 aaKnown RBP11.05□□□□□ -0.64
VRK3-205ENST00000593919 RNF126Q9BV68 326 aa11.05□□□□□ -0.64
VRK3-205ENST00000593919 RIMS4Q9H426 269 aaPredicted RBP11.05□□□□□ -0.64
VRK3-205ENST00000593919 Q9N2K0 584 aa11.05□□□□□ -0.64
VRK3-205ENST00000593919 SDHAF2Q9NX18 166 aa11.05□□□□□ -0.64
VRK3-205ENST00000593919 GSKIPQ9P0R6 139 aa11.05□□□□□ -0.64
VRK3-205ENST00000593919 DOCK11Q5JSL3 2073 aa11.04□□□□□ -0.64
VRK3-205ENST00000593919 CENPEQ02224 2701 aa11.04□□□□□ -0.64
VRK3-205ENST00000593919 CRYM-AS1A6NIL9 109 aa11.04□□□□□ -0.64
VRK3-205ENST00000593919 F5H0A9 414 aaPredicted RBP11.04□□□□□ -0.64
VRK3-205ENST00000593919 H0YIZ8 118 aa11.04□□□□□ -0.64
VRK3-205ENST00000593919 FCGR2CP31995 323 aa11.04□□□□□ -0.64
VRK3-205ENST00000593919 OR3A1P47881 315 aa11.04□□□□□ -0.64
VRK3-205ENST00000593919 DHRS11Q6UWP2 260 aa11.04□□□□□ -0.64
VRK3-205ENST00000593919 DTX2Q86UW9 622 aa11.04□□□□□ -0.64
VRK3-205ENST00000593919 PDZD9Q8IXQ8 264 aa11.04□□□□□ -0.64
VRK3-205ENST00000593919 C2orf50Q96LR7 162 aa11.04□□□□□ -0.64
VRK3-205ENST00000593919 REG4Q9BYZ8 158 aa11.04□□□□□ -0.64
VRK3-205ENST00000593919 TMEM106BQ9NUM4 274 aa11.04□□□□□ -0.64
VRK3-205ENST00000593919 PFDN2Q9UHV9 154 aa11.04□□□□□ -0.64
VRK3-205ENST00000593919 USP9YO00507 2555 aaPredicted RBP11.03□□□□□ -0.64
VRK3-205ENST00000593919 ASH1LQ9NR48 2969 aaKnown RBP11.03□□□□□ -0.64
VRK3-205ENST00000593919 TRBV6-6A0A0A6YYG2 114 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 IGHV1-69-2A0A0G2JMI3 117 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 OOEPA6NGQ2 149 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 TMEM178BH3BS89 294 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 ZNF737O75373 536 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 PIGPP57054 158 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 S100A10P60903 97 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 ABCA11PQ4W5N1 156 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 TEX36Q5VZQ5 186 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 STUMQ69YW2 141 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 Q6ZS49 121 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 IQCF2Q8IXL9 164 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 C1orf87Q8N0U7 546 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 GAPTQ8N292 157 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 DEFB108BQ8NET1 73 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 LRRC20Q8TCA0 184 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 SHARPINQ9H0F6 387 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 UBTD1Q9HAC8 227 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 OR5AC2Q9NZP5 309 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 MUC1P15941 1255 aaPredicted RBP11.03□□□□□ -0.64
VRK3-205ENST00000593919 RCC1P18754 421 aaPredicted RBP11.03□□□□□ -0.64
VRK3-205ENST00000593919 GLP1RP43220 463 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 RAB32Q13637 225 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 SRSF7Q16629 238 aaKnown RBP eCLIP11.03□□□□□ -0.64
VRK3-205ENST00000593919 PHLDA2Q53GA4 152 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 ZNF880Q6PDB4 577 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 C5orf24Q7Z6I8 188 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 ZNRF1Q8ND25 227 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 OR1S1Q8NH92 325 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 MARVELD3Q96A59 401 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 RRNAD1Q96FB5 475 aaKnown RBP11.03□□□□□ -0.64
VRK3-205ENST00000593919 COQ2Q96H96 371 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 SEBOXQ9HB31 216 aaPredicted RBP11.03□□□□□ -0.64
VRK3-205ENST00000593919 LAMP3Q9UQV4 416 aa11.03□□□□□ -0.64
VRK3-205ENST00000593919 SPG11Q96JI7 2443 aa11.02□□□□□ -0.65
VRK3-205ENST00000593919 MFSD2BA6NFX1 497 aa11.02□□□□□ -0.65
VRK3-205ENST00000593919 FOSL1P15407 271 aa11.02□□□□□ -0.65
VRK3-205ENST00000593919 KCNJ3P48549 501 aa11.02□□□□□ -0.65
VRK3-205ENST00000593919 AESQ08117 197 aa11.02□□□□□ -0.65
VRK3-205ENST00000593919 SP6Q3SY56 376 aa11.02□□□□□ -0.65
VRK3-205ENST00000593919 PRSS54Q6PEW0 395 aa11.02□□□□□ -0.65
VRK3-205ENST00000593919 FOXRED2Q8IWF2 684 aa11.02□□□□□ -0.65
VRK3-205ENST00000593919 TRBV6-7A0A0A0MS04 114 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 TRAV39A0A0B4J263 110 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 H7C1Q1 480 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 GYPAP02724 150 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 SCTP09683 121 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 SELLP14151 372 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 AADACP22760 399 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 NUP62P37198 522 aaPredicted RBP11.01□□□□□ -0.65
VRK3-205ENST00000593919 HERV-K104P61576 105 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 IAH1Q2TAA2 248 aaPredicted RBP11.01□□□□□ -0.65
VRK3-205ENST00000593919 IGSF11Q5DX21 431 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 NINJ1Q92982 152 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 SLC25A32Q9H2D1 315 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 MED9Q9NWA0 146 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 TRAPPC2LQ9UL33 140 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 SESN1Q9Y6P5 492 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 HELZ2Q9BYK8 2649 aaKnown RBP11.01□□□□□ -0.65
VRK3-205ENST00000593919 TRAV38-1A0A0B4J264 116 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 KIR2DS1A0A191URI9 304 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 A0A1B0GW55 424 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 TMEM30CPA0ZSE6 113 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 MSGN1A6NI15 193 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 TRDCB7Z8K6 153 aa11.01□□□□□ -0.65
VRK3-205ENST00000593919 LGALS8O00214 317 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms