RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 SLC25A42Q86VD7 318 aa16.26■□□□□ 0.19
LSM4-203ENST00000593829 OR13C8Q8NGS7 320 aa16.26■□□□□ 0.19
LSM4-203ENST00000593829 LOC105371242A0A075B767 164 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 MEIS3P1A6NDR6 274 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 ZNF736B4DX44 427 aaPredicted RBP16.25■□□□□ 0.19
LSM4-203ENST00000593829 DISC1C4P0D8 188 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 FGF16O43320 207 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 NDUFB3O43676 98 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 FCER2P06734 321 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 RAB6AP20340 208 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 ZBTB25P24278 435 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 HOXA1P49639 335 aaPredicted RBP16.25■□□□□ 0.19
LSM4-203ENST00000593829 LUMP51884 338 aaPredicted RBP16.25■□□□□ 0.19
LSM4-203ENST00000593829 CRIP3Q6Q6R5 217 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 DUX4L9Q6RFH8 374 aaPredicted RBP16.25■□□□□ 0.19
LSM4-203ENST00000593829 OR5D18Q8NGL1 313 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 GAFA1Q96PS6 74 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 PRRT1Q99946 306 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 TINAGL1Q9GZM7 467 aaPredicted RBP16.25■□□□□ 0.19
LSM4-203ENST00000593829 ZNF230Q9UIE0 474 aaPredicted RBP16.25■□□□□ 0.19
LSM4-203ENST00000593829 INSIG2Q9Y5U4 225 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 F8VVB4 439 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 F8VWA3 439 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 SIGLEC5O15389 551 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 TFF1P04155 84 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 PAX2Q02962 417 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 LRRC10Q5BKY1 277 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 C1orf100Q5SVJ3 147 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 C10orf91Q5T1B1 145 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 LYG2Q86SG7 212 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 SAXO1Q8IYX7 474 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 BPIFB2Q8N4F0 458 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 OR52N4Q8NGI2 321 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 STOML3Q8TAV4 291 aa16.25■□□□□ 0.19
LSM4-203ENST00000593829 SETD2Q9BYW2 2564 aaPredicted RBP16.25■□□□□ 0.19
LSM4-203ENST00000593829 IGHV2-70DA0A0C4DH43 119 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 TMEM218A2RU14 115 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 KNG1P01042 644 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 TMEM225BP0DP42 221 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 BDKRB2P30411 391 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 PRDX2P32119 198 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 FAM74A1Q5RGS3 127 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 BTNL3Q6UXE8 466 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 IL17RELQ6ZVW7 336 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 TMED4Q7Z7H5 227 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 ZSCAN4Q8NAM6 433 aaPredicted RBP16.24■□□□□ 0.19
LSM4-203ENST00000593829 TMEM185AQ8NFB2 350 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 MITD1Q8WV92 249 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 EMG1Q92979 244 aaKnown RBP16.24■□□□□ 0.19
LSM4-203ENST00000593829 SDSLQ96GA7 329 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 GPER1Q99527 375 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 C7orf69Q9H7B7 122 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 NF1P21359 2839 aa16.24■□□□□ 0.19
LSM4-203ENST00000593829 GPR37O15354 613 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 ANGPTL7O43827 346 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 FCN3O75636 299 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 BCL3P20749 454 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 NPBWR2P48146 333 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 ELP2Q6IA86 826 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 RAB12Q6IQ22 244 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 SVBPQ8N300 66 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 CD177Q8N6Q3 437 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 NUDT16L1Q9BRJ7 211 aaKnown RBP16.23■□□□□ 0.19
LSM4-203ENST00000593829 ZNF471Q9BX82 626 aaPredicted RBP16.23■□□□□ 0.19
LSM4-203ENST00000593829 OR14J1Q9UGF5 321 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 ARHGAP32A7KAX9 2087 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 ANK3Q12955 4377 aaKnown RBP16.23■□□□□ 0.19
LSM4-203ENST00000593829 IGKV1-12A0A0C4DH73 117 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 KIR2DS1A0A191URI9 304 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 C22orf46C9J442 243 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 M0QYG6 137 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 IGKV1D-12P01611 117 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 SELLP14151 372 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 FIP1L1Q6UN15 594 aaKnown RBP16.23■□□□□ 0.19
LSM4-203ENST00000593829 LYPD6Q86Y78 171 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 FAM58AQ8N1B3 248 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 TEX29Q8N6K0 151 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 KCNK15Q9H427 330 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 RHOFQ9HBH0 211 aa16.23■□□□□ 0.19
LSM4-203ENST00000593829 SLC25A10Q9UBX3 287 aaPredicted RBP16.23■□□□□ 0.19
LSM4-203ENST00000593829 H7C2Y5 167 aa16.22■□□□□ 0.19
LSM4-203ENST00000593829 ENSAO43768 121 aaKnown RBP16.22■□□□□ 0.19
LSM4-203ENST00000593829 HOXB4P17483 251 aaPredicted RBP16.22■□□□□ 0.19
LSM4-203ENST00000593829 RIPPLY3P57055 190 aa16.22■□□□□ 0.19
LSM4-203ENST00000593829 PNLIPRP3Q17RR3 467 aa16.22■□□□□ 0.19
LSM4-203ENST00000593829 FGFRL1Q8N441 504 aa16.22■□□□□ 0.19
LSM4-203ENST00000593829 ZNF561Q8N587 486 aa16.22■□□□□ 0.19
LSM4-203ENST00000593829 NKAIN3Q8N8D7 197 aa16.22■□□□□ 0.19
LSM4-203ENST00000593829 ZNRF1Q8ND25 227 aa16.22■□□□□ 0.19
LSM4-203ENST00000593829 PPP1R1CQ8WVI7 109 aa16.22■□□□□ 0.19
LSM4-203ENST00000593829 FOXRED1Q96CU9 486 aaPredicted RBP16.22■□□□□ 0.19
LSM4-203ENST00000593829 SLC6A7Q99884 636 aa16.22■□□□□ 0.19
LSM4-203ENST00000593829 PDCD10Q9BUL8 212 aa16.22■□□□□ 0.19
LSM4-203ENST00000593829 CARHSP1Q9Y2V2 147 aaKnown RBP16.22■□□□□ 0.19
LSM4-203ENST00000593829 TRBV6-7A0A0A0MS04 114 aa16.21■□□□□ 0.19
LSM4-203ENST00000593829 AVPP01185 164 aa16.21■□□□□ 0.19
LSM4-203ENST00000593829 HLA-AP01891 365 aaKnown RBP16.21■□□□□ 0.19
LSM4-203ENST00000593829 ZNF93P35789 620 aaPredicted RBP16.21■□□□□ 0.19
LSM4-203ENST00000593829 PAX8Q06710 450 aa16.21■□□□□ 0.19
LSM4-203ENST00000593829 THAP6Q8TBB0 222 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms