RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 RRP9O43818 475 aaKnown RBP11.58□□□□□ -0.56
PNKP-202ENST00000593706 GAPDHP04406 335 aaKnown RBP11.58□□□□□ -0.56
PNKP-202ENST00000593706 UCHL1P09936 223 aa11.58□□□□□ -0.56
PNKP-202ENST00000593706 GPR12P47775 334 aa11.58□□□□□ -0.56
PNKP-202ENST00000593706 ZNF816Q0VGE8 651 aaPredicted RBP11.58□□□□□ -0.56
PNKP-202ENST00000593706 TPBGQ13641 420 aa11.58□□□□□ -0.56
PNKP-202ENST00000593706 PNLIPRP3Q17RR3 467 aa11.58□□□□□ -0.56
PNKP-202ENST00000593706 C9orf66Q5T8R8 295 aa11.58□□□□□ -0.56
PNKP-202ENST00000593706 AWAT2Q6E213 333 aa11.58□□□□□ -0.56
PNKP-202ENST00000593706 SLC16A12Q6ZSM3 486 aa11.58□□□□□ -0.56
PNKP-202ENST00000593706 LCNL1Q6ZST4 164 aa11.58□□□□□ -0.56
PNKP-202ENST00000593706 TGIF2LXQ8IUE1 241 aa11.58□□□□□ -0.56
PNKP-202ENST00000593706 EAF1Q96JC9 268 aaPredicted RBP11.58□□□□□ -0.56
PNKP-202ENST00000593706 S100A13Q99584 98 aa11.58□□□□□ -0.56
PNKP-202ENST00000593706 TMED9Q9BVK6 235 aa11.58□□□□□ -0.56
PNKP-202ENST00000593706 VCX3BQ9H321 246 aa11.58□□□□□ -0.56
PNKP-202ENST00000593706 LIN7CQ9NUP9 197 aaKnown RBP11.58□□□□□ -0.56
PNKP-202ENST00000593706 TPRKBQ9Y3C4 175 aa11.58□□□□□ -0.56
PNKP-202ENST00000593706 HUWE1Q7Z6Z7 4374 aaKnown RBP11.58□□□□□ -0.56
PNKP-202ENST00000593706 FAM90A10PA6NDY2 464 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 FAM90A7PA6NKC0 464 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 LINC01548A6NM66 108 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 FAM90A23PA8MXZ1 464 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 SEC14L6B5MCN3 397 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 RGS10O43665 173 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 MT-ND4P03905 459 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 MGMTP16455 207 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 ECI1P42126 302 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 HSPA13P48723 471 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 MED22Q15528 200 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 C1orf100Q5SVJ3 147 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 LIPKQ5VXJ0 399 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 TMEM91Q6ZNR0 172 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 PRSS48Q7RTY5 328 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 IZUMO1Q8IYV9 350 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 OR2T10Q8NGZ9 312 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 ABCG5Q9H222 651 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 BANF2Q9H503 90 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 SPACA1Q9HBV2 294 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 ISYNA1Q9NPH2 558 aa11.57□□□□□ -0.56
PNKP-202ENST00000593706 SDCBPO00560 298 aaPredicted RBP11.56□□□□□ -0.56
PNKP-202ENST00000593706 IL3RAP26951 378 aa11.56□□□□□ -0.56
PNKP-202ENST00000593706 VHLP40337 213 aa11.56□□□□□ -0.56
PNKP-202ENST00000593706 FOXE3Q13461 319 aa11.56□□□□□ -0.56
PNKP-202ENST00000593706 RAB12Q6IQ22 244 aa11.56□□□□□ -0.56
PNKP-202ENST00000593706 NEK7Q8TDX7 302 aa11.56□□□□□ -0.56
PNKP-202ENST00000593706 GFI1Q99684 422 aa11.56□□□□□ -0.56
PNKP-202ENST00000593706 GHRLQ9UBU3 117 aa11.56□□□□□ -0.56
PNKP-202ENST00000593706 DYNC2H1Q8NCM8 4307 aaKnown RBP11.56□□□□□ -0.56
PNKP-202ENST00000593706 SLC22A1O15245 554 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 ORC5O43913 435 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 ATP6V1G2O95670 118 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 CPEP16870 476 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 GZMHP20718 246 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 VDAC1P21796 283 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 MAP2K4P45985 399 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 RPS25P62851 125 aaKnown RBP11.55□□□□□ -0.56
PNKP-202ENST00000593706 QRFPP83859 136 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 MLLT11Q13015 90 aaPredicted RBP11.55□□□□□ -0.56
PNKP-202ENST00000593706 EBI3Q14213 229 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 TBCEQ15813 527 aaPredicted RBP11.55□□□□□ -0.56
PNKP-202ENST00000593706 ATAD3CQ5T2N8 411 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 FAM53AQ6NSI3 398 aaPredicted RBP11.55□□□□□ -0.56
PNKP-202ENST00000593706 CEACAM19Q7Z692 300 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 C8orf31Q8N9H6 132 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 Q8N9W7 124 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 OR52M1Q8NGK5 317 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 UBALD1Q8TB05 177 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 RTN4IP1Q8WWV3 396 aaPredicted RBP11.55□□□□□ -0.56
PNKP-202ENST00000593706 UFD1Q92890 307 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 ARL11Q969Q4 196 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 ASCL2Q99929 193 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 RASL11BQ9BPW5 248 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 SELENOIQ9C0D9 397 aa11.55□□□□□ -0.56
PNKP-202ENST00000593706 LSM4Q9Y4Z0 139 aaKnown RBP11.55□□□□□ -0.56
PNKP-202ENST00000593706 IGHV3-43A0A0B4J1X8 118 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 C12orf77C9JDV5 145 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 AIPO00170 330 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 CRTAPO75718 401 aaPredicted RBP11.54□□□□□ -0.56
PNKP-202ENST00000593706 LY86O95711 162 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 MOSP00540 346 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 GLAP06280 429 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 ELANEP08246 267 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 UBBP0CG47 229 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 IGHV3-43DP0DP04 118 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 SRMP19623 302 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 CDX1P47902 265 aaPredicted RBP11.54□□□□□ -0.56
PNKP-202ENST00000593706 UNC119Q13432 240 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 KIR2DS1Q14954 304 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 HSD17B12Q53GQ0 312 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 NKAPLQ5M9Q1 402 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 RBM48Q5RL73 367 aaKnown RBP11.54□□□□□ -0.56
PNKP-202ENST00000593706 Q8N6K4 173 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 ZNF439Q8NDP4 499 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 C4orf3Q8WVX3 66 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 TMEM203Q969S6 136 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 FAM46BQ96A09 425 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 CNBD2Q96M20 576 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 S1PR3Q99500 378 aa11.54□□□□□ -0.56
PNKP-202ENST00000593706 KCNK15Q9H427 330 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms