RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 MAS1P04201 325 aa10.44□□□□□ -0.74
APOC1-209ENST00000592885 UBBP0CG47 229 aa10.44□□□□□ -0.74
APOC1-209ENST00000592885 GPR50Q13585 617 aa10.44□□□□□ -0.74
APOC1-209ENST00000592885 LRRC36Q1X8D7 754 aa10.44□□□□□ -0.74
APOC1-209ENST00000592885 LY6G6FQ5SQ64 297 aa10.44□□□□□ -0.74
APOC1-209ENST00000592885 UNQ9370/PRO34162Q6UXP9 181 aa10.44□□□□□ -0.74
APOC1-209ENST00000592885 UBALD1Q8TB05 177 aa10.44□□□□□ -0.74
APOC1-209ENST00000592885 FBLIM1Q8WUP2 373 aa10.44□□□□□ -0.74
APOC1-209ENST00000592885 PLSCR3Q9NRY6 295 aa10.44□□□□□ -0.74
APOC1-209ENST00000592885 KCNIP1Q9NZI2 227 aa10.44□□□□□ -0.74
APOC1-209ENST00000592885 PSORS1C1Q9UIG5 152 aa10.44□□□□□ -0.74
APOC1-209ENST00000592885 LINC00527Q9UJ94 153 aa10.44□□□□□ -0.74
APOC1-209ENST00000592885 WI2-2373I1.2A0A1W2PRP0 233 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 SLC31A2O15432 143 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 RGS11O94810 467 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 IGHG4P01861 327 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 IGF1P05019 195 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 CELP19835 753 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 VDAC1P21796 283 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 HOXD3P31249 432 aaPredicted RBP10.43□□□□□ -0.74
APOC1-209ENST00000592885 SOX6P35712 828 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 CDX1P47902 265 aaPredicted RBP10.43□□□□□ -0.74
APOC1-209ENST00000592885 HTD2P86397 168 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 CFHR3Q02985 330 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 LSAMPQ13449 338 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 RCN1Q15293 331 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 CT45A1Q5HYN5 189 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 VAX1Q5SQQ9 334 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 C18orf65Q6ZTR6 163 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 AHSA2Q719I0 299 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 PRR18Q8N4B5 295 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 OR10V1Q8NGI7 309 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 OR1L1Q8NH94 360 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 CT45A3Q8NHU0 189 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 ABHD14AQ9BUJ0 271 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 BANF2Q9H503 90 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 TAF9BQ9HBM6 251 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 ERGIC3Q9Y282 383 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 LRRC42Q9Y546 428 aa10.43□□□□□ -0.74
APOC1-209ENST00000592885 PNMA8CA0A1B0GUJ8 204 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 A0A1W2PPK0 400 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 LINC01548A6NM66 108 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 CCL24O00175 119 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 CASQ2O14958 399 aaPredicted RBP10.42□□□□□ -0.74
APOC1-209ENST00000592885 RAMP3O60896 148 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 RCC1P18754 421 aaPredicted RBP10.42□□□□□ -0.74
APOC1-209ENST00000592885 VHLP40337 213 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 ZNF134P52741 427 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 KIR2DS1Q14954 304 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 MORN2Q502X0 79 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 C6orf141Q5SZD1 244 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 OGFRL1Q5TC84 451 aaPredicted RBP10.42□□□□□ -0.74
APOC1-209ENST00000592885 RNLSQ5VYX0 342 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 SIGIRRQ6IA17 410 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 FAM53AQ6NSI3 398 aaPredicted RBP10.42□□□□□ -0.74
APOC1-209ENST00000592885 MS4A15Q8N5U1 240 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 NANOGP1Q8N7R0 232 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 OR5M8Q8NGP6 311 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 MRPL30Q8TCC3 161 aaKnown RBP10.42□□□□□ -0.74
APOC1-209ENST00000592885 PHYHIPQ92561 330 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 TFAP2CQ92754 450 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 RAX2Q96IS3 184 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 B9D2Q9BPU9 175 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 MND1Q9BWT6 205 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 VCXQ9H320 206 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 DCLRE1BQ9H816 532 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 OR2S2Q9NQN1 319 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 FKBP14Q9NWM8 211 aa10.42□□□□□ -0.74
APOC1-209ENST00000592885 ZNF736B4DX44 427 aaPredicted RBP10.41□□□□□ -0.74
APOC1-209ENST00000592885 YPEL1O60688 119 aa10.41□□□□□ -0.74
APOC1-209ENST00000592885 RPLP1P05386 114 aaKnown RBP10.41□□□□□ -0.74
APOC1-209ENST00000592885 GNAO1P09471 354 aa10.41□□□□□ -0.74
APOC1-209ENST00000592885 DGCR2P98153 550 aa10.41□□□□□ -0.74
APOC1-209ENST00000592885 DEFB121Q5J5C9 76 aa10.41□□□□□ -0.74
APOC1-209ENST00000592885 GLT8D1Q68CQ7 371 aa10.41□□□□□ -0.74
APOC1-209ENST00000592885 LAIR2Q6ISS4 152 aa10.41□□□□□ -0.74
APOC1-209ENST00000592885 FAM71F2Q6NXP2 309 aa10.41□□□□□ -0.74
APOC1-209ENST00000592885 C4orf3Q8WVX3 66 aa10.41□□□□□ -0.74
APOC1-209ENST00000592885 YPEL2Q96QA6 119 aa10.41□□□□□ -0.74
APOC1-209ENST00000592885 HSPB9Q9BQS6 159 aa10.41□□□□□ -0.74
APOC1-209ENST00000592885 ZNF107Q9UII5 783 aaPredicted RBP10.41□□□□□ -0.74
APOC1-209ENST00000592885 UBE2QL1A1L167 161 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 HLA-DRB1P01911 266 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 PSMB8P28062 276 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 CHATP28329 748 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 F2RL1P55085 397 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 CD69Q07108 199 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 FHL3Q13643 280 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 MMDQ15546 238 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 HMGN3Q15651 99 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 C9orf66Q5T8R8 295 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 ZNF833PQ6ZTB9 187 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 MOB1BQ7L9L4 216 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 BPIFB6Q8NFQ5 453 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 MYOZ3Q8TDC0 251 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 GALMQ96C23 342 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 NEDD4LQ96PU5 975 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 ABRACLQ9P1F3 81 aa10.4□□□□□ -0.74
APOC1-209ENST00000592885 CDK1P06493 297 aa10.39□□□□□ -0.75
APOC1-209ENST00000592885 PPP1CCP36873 323 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms