RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 UNC119Q13432 240 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 EBI3Q14213 229 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 TMEM30BQ3MIR4 351 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 CT45A1Q5HYN5 189 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 SAMD5Q5TGI4 173 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 TMEM91Q6ZNR0 172 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 SLC25A48Q6ZT89 311 aaKnown RBP11.01□□□□□ -0.65
APOC1-208ENST00000592535 IZUMO1Q8IYV9 350 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 CT45A3Q8NHU0 189 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 RTN4IP1Q8WWV3 396 aaPredicted RBP11.01□□□□□ -0.65
APOC1-208ENST00000592535 GFI1Q99684 422 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 SULT4A1Q9BR01 284 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 NICN1Q9BSH3 213 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 TMEM59Q9BXS4 323 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 ISYNA1Q9NPH2 558 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 MBNL3Q9NUK0 354 aaKnown RBP11.01□□□□□ -0.65
APOC1-208ENST00000592535 TCRBV4S1A1TA0A5B7 111 aa11□□□□□ -0.65
APOC1-208ENST00000592535 FGF16O43320 207 aa11□□□□□ -0.65
APOC1-208ENST00000592535 CPEP16870 476 aa11□□□□□ -0.65
APOC1-208ENST00000592535 QRFPP83859 136 aa11□□□□□ -0.65
APOC1-208ENST00000592535 MLLT11Q13015 90 aaPredicted RBP11□□□□□ -0.65
APOC1-208ENST00000592535 GNMTQ14749 295 aa11□□□□□ -0.65
APOC1-208ENST00000592535 BEAN1Q3B7T3 259 aa11□□□□□ -0.65
APOC1-208ENST00000592535 PRSS48Q7RTY5 328 aa11□□□□□ -0.65
APOC1-208ENST00000592535 OR4X2Q8NGF9 303 aa11□□□□□ -0.65
APOC1-208ENST00000592535 OR52L2PQ8NGH6 319 aa11□□□□□ -0.65
APOC1-208ENST00000592535 RBMXL1Q96E39 390 aaKnown RBP11□□□□□ -0.65
APOC1-208ENST00000592535 EAF1Q96JC9 268 aaPredicted RBP11□□□□□ -0.65
APOC1-208ENST00000592535 CNBD2Q96M20 576 aa11□□□□□ -0.65
APOC1-208ENST00000592535 NEDD4LQ96PU5 975 aa11□□□□□ -0.65
APOC1-208ENST00000592535 FAAP24Q9BTP7 215 aa11□□□□□ -0.65
APOC1-208ENST00000592535 TM2D1Q9BX74 207 aa11□□□□□ -0.65
APOC1-208ENST00000592535 Q9H521 79 aa11□□□□□ -0.65
APOC1-208ENST00000592535 KCNIP1Q9NZI2 227 aa11□□□□□ -0.65
APOC1-208ENST00000592535 TMEM14DPA8MWL7 114 aa10.99□□□□□ -0.65
APOC1-208ENST00000592535 ZNF736B4DX44 427 aaPredicted RBP10.99□□□□□ -0.65
APOC1-208ENST00000592535 ZNF137PP52743 207 aa10.99□□□□□ -0.65
APOC1-208ENST00000592535 P2RY14Q15391 338 aa10.99□□□□□ -0.65
APOC1-208ENST00000592535 TRAM1Q15629 374 aa10.99□□□□□ -0.65
APOC1-208ENST00000592535 MORN2Q502X0 79 aa10.99□□□□□ -0.65
APOC1-208ENST00000592535 C6orf201Q7Z4U5 140 aa10.99□□□□□ -0.65
APOC1-208ENST00000592535 TGIF2LXQ8IUE1 241 aa10.99□□□□□ -0.65
APOC1-208ENST00000592535 Q8N6K4 173 aa10.99□□□□□ -0.65
APOC1-208ENST00000592535 OR6M1Q8NGM8 313 aa10.99□□□□□ -0.65
APOC1-208ENST00000592535 OR2T10Q8NGZ9 312 aa10.99□□□□□ -0.65
APOC1-208ENST00000592535 KCNG3Q8TAE7 436 aa10.99□□□□□ -0.65
APOC1-208ENST00000592535 NOL4LQ96MY1 436 aaPredicted RBP10.99□□□□□ -0.65
APOC1-208ENST00000592535 MGLLQ99685 303 aa10.99□□□□□ -0.65
APOC1-208ENST00000592535 OR2S2Q9NQN1 319 aa10.99□□□□□ -0.65
APOC1-208ENST00000592535 AK6Q9Y3D8 172 aaKnown RBP10.99□□□□□ -0.65
APOC1-208ENST00000592535 TSSC4Q9Y5U2 329 aaPredicted RBP10.99□□□□□ -0.65
APOC1-208ENST00000592535 A0A0A6YYD4 124 aa10.98□□□□□ -0.65
APOC1-208ENST00000592535 PSMB11A5LHX3 300 aa10.98□□□□□ -0.65
APOC1-208ENST00000592535 NCBP2LA6PVI3 153 aaKnown RBP10.98□□□□□ -0.65
APOC1-208ENST00000592535 BPNT1O95861 308 aa10.98□□□□□ -0.65
APOC1-208ENST00000592535 PF4V1P10720 104 aa10.98□□□□□ -0.65
APOC1-208ENST00000592535 PSMA1P25786 263 aaKnown RBP10.98□□□□□ -0.65
APOC1-208ENST00000592535 CD1BP29016 333 aa10.98□□□□□ -0.65
APOC1-208ENST00000592535 BLVRBP30043 206 aaPredicted RBP10.98□□□□□ -0.65
APOC1-208ENST00000592535 PPP1CCP36873 323 aaKnown RBP10.98□□□□□ -0.65
APOC1-208ENST00000592535 FABP5Q01469 135 aa10.98□□□□□ -0.65
APOC1-208ENST00000592535 OXLD1Q5BKU9 147 aa10.98□□□□□ -0.65
APOC1-208ENST00000592535 KHDC1LQ5JSQ8 128 aa10.98□□□□□ -0.65
APOC1-208ENST00000592535 KPRPQ5T749 579 aaPredicted RBP10.98□□□□□ -0.65
APOC1-208ENST00000592535 Q6ZPA2 131 aa10.98□□□□□ -0.65
APOC1-208ENST00000592535 ZNF554Q86TJ5 538 aa10.98□□□□□ -0.65
APOC1-208ENST00000592535 ZNF329Q86UD4 541 aa10.98□□□□□ -0.65
APOC1-208ENST00000592535 LPAR5Q9H1C0 372 aa10.98□□□□□ -0.65
APOC1-208ENST00000592535 PLGRKTQ9HBL7 147 aa10.98□□□□□ -0.65
APOC1-208ENST00000592535 LINC00527Q9UJ94 153 aa10.98□□□□□ -0.65
APOC1-208ENST00000592535 JPT1Q9UK76 154 aa10.98□□□□□ -0.65
APOC1-208ENST00000592535 LINC01548A6NM66 108 aa10.97□□□□□ -0.65
APOC1-208ENST00000592535 SERPINE3A8MV23 424 aa10.97□□□□□ -0.65
APOC1-208ENST00000592535 SLC17A2O00624 439 aa10.97□□□□□ -0.65
APOC1-208ENST00000592535 TXNL1O43396 289 aa10.97□□□□□ -0.65
APOC1-208ENST00000592535 ARL6IP5O75915 188 aa10.97□□□□□ -0.65
APOC1-208ENST00000592535 IGHG2P01859 326 aa10.97□□□□□ -0.65
APOC1-208ENST00000592535 HMGN3Q15651 99 aa10.97□□□□□ -0.65
APOC1-208ENST00000592535 TBCEQ15813 527 aaPredicted RBP10.97□□□□□ -0.65
APOC1-208ENST00000592535 STEAP3Q658P3 488 aa10.97□□□□□ -0.65
APOC1-208ENST00000592535 OR2W3Q7Z3T1 314 aa10.97□□□□□ -0.65
APOC1-208ENST00000592535 SLC35E3Q7Z769 313 aa10.97□□□□□ -0.65
APOC1-208ENST00000592535 SVOPQ8N4V2 548 aa10.97□□□□□ -0.65
APOC1-208ENST00000592535 Q8N9W7 124 aa10.97□□□□□ -0.65
APOC1-208ENST00000592535 ABHD14AQ9BUJ0 271 aa10.97□□□□□ -0.65
APOC1-208ENST00000592535 NOTCH3Q9UM47 2321 aa10.97□□□□□ -0.65
APOC1-208ENST00000592535 SOCS1O15524 211 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 LANCL1O43813 399 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 YPEL1O60688 119 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 NAPSAO96009 420 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 MOSP00540 346 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 PRB2P02812 416 aaPredicted RBP10.96□□□□□ -0.65
APOC1-208ENST00000592535 ARSBP15848 533 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 CALRP27797 417 aaKnown RBP10.96□□□□□ -0.65
APOC1-208ENST00000592535 CLDN12P56749 244 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 HTD2P86397 168 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 RAB11BQ15907 218 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 SSX1Q16384 188 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 ZNF880Q6PDB4 577 aa10.96□□□□□ -0.65
APOC1-208ENST00000592535 ZNF367Q7RTV3 350 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms