RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 GPR84Q9NQS5 396 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 MRPL17Q9NRX2 175 aaKnown RBP2.78□□□□□ -1.96
VMP1-212ENST00000591782 UQCC1Q9NVA1 299 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 GPATCH2LQ9NWQ4 482 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 MARCH5Q9NX47 278 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 OR5AC2Q9NZP5 309 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 PRO0628Q9UI54 55 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 CYSLTR1Q9Y271 337 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 TMED7Q9Y3B3 224 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 RNF11Q9Y3C5 154 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 CSAG2Q9Y5P2 127 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 SOX21Q9Y651 276 aaPredicted RBP2.78□□□□□ -1.96
VMP1-212ENST00000591782 WSB1Q9Y6I7 421 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 GON4LQ3T8J9 2241 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 SHANK3Q9BYB0 1731 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 SIGLEC1Q9BZZ2 1709 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 PIK3C2AO00443 1686 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 IQGAP3Q86VI3 1631 aa2.78□□□□□ -1.96
VMP1-212ENST00000591782 NFAT5O94916 1531 aa2.78□□□□□ -1.97
VMP1-212ENST00000591782 MYO5AQ9Y4I1 1855 aaKnown RBP2.77□□□□□ -1.97
VMP1-212ENST00000591782 USP6P35125 1406 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 FRMPD3Q5JV73 1810 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 DOCK2Q92608 1830 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 FMN2Q9NZ56 1722 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 PARP4Q9UKK3 1724 aaKnown RBP2.77□□□□□ -1.97
VMP1-212ENST00000591782 TRAV36DV7A0A075B6V5 113 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 A0A0D9SG52 128 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 A0A1B0GX51 115 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 KANTRA0A1W2PQU2 76 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 PRSS37A4D1T9 235 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 TVP23AA6NH52 213 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 COLCA2A8K830 154 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 HMSDA8MTL9 139 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 BBIP1A8MTZ0 92 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 BTNL10A8MVZ5 291 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 H3BTX0 84 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 PRKAB2O43741 272 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 GALR3O60755 368 aaPredicted RBP2.77□□□□□ -1.97
VMP1-212ENST00000591782 TBL1XO60907 577 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 DUSP11O75319 330 aaKnown RBP2.77□□□□□ -1.97
VMP1-212ENST00000591782 CDRT1O95170 752 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 KLF8O95600 359 aaPredicted RBP2.77□□□□□ -1.97
VMP1-212ENST00000591782 TIMP1P01033 207 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 NRASP01111 189 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 KLK1P06870 262 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 OR4Q2P0C623 313 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 CT45A6P0DMU7 189 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 CT45A5P0DMU8 189 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 CT45A7P0DMV0 189 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 OR12D1P0DN82 309 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 ERGP11308 486 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 B4GALT1P15291 398 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 MGMTP16455 207 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 PGCP20142 388 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 EVI2AP22794 236 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 NFYBP25208 207 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 RPL12P30050 165 aaKnown RBP2.77□□□□□ -1.97
VMP1-212ENST00000591782 SDC2P34741 201 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 ELK3P41970 407 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 NSG1P42857 185 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 TNFRSF4P43489 277 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 GPR6P46095 362 aaPredicted RBP2.77□□□□□ -1.97
VMP1-212ENST00000591782 RGRP47804 291 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 LHX2P50458 406 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 ATP4BP51164 291 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 CCL11P51671 97 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 HNRNPA3P51991 378 aaKnown RBP2.77□□□□□ -1.97
VMP1-212ENST00000591782 NDUFV3P56181 108 aaKnown RBP2.77□□□□□ -1.97
VMP1-212ENST00000591782 NDUFA6P56556 154 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 CLDN6P56747 220 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 OR12D2P58182 307 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 TAS2R31P59538 309 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 HOXC5Q00444 222 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 PLCXD2Q0VAA5 305 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 TMEM267Q0VDI3 215 aaPredicted RBP2.77□□□□□ -1.97
VMP1-212ENST00000591782 RAB35Q15286 201 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 C3AR1Q16581 482 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 TBC1D28Q2M2D7 210 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 CCSMST1Q4G0I0 132 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 CT45A1Q5HYN5 189 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 NXNL2Q5VZ03 156 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 GLT8D1Q68CQ7 371 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 OPN5Q6U736 354 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 TMEM183AQ8IXX5 376 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 DEFB107AQ8IZN7 70 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 ZNF444Q8N0Y2 327 aaPredicted RBP2.77□□□□□ -1.97
VMP1-212ENST00000591782 HIST3H2BBQ8N257 126 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 ZNF664Q8N3J9 261 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 KIR3DL3Q8N743 410 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 ARIH2OSQ8N7S6 290 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 TMEM99Q8N816 258 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 SUMF2Q8NBJ7 301 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 RELL2Q8NC24 303 aaPredicted RBP2.77□□□□□ -1.97
VMP1-212ENST00000591782 OR52L1Q8NGH7 329 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 OR51A2Q8NGJ7 313 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 OR1N2Q8NGR9 330 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 CT45A3Q8NHU0 189 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 LYPD6BQ8NI32 183 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 FAM110BQ8TC76 370 aa2.77□□□□□ -1.97
VMP1-212ENST00000591782 RDH5Q92781 318 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms