RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 OR5AU1Q8NGC0 362 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 OR52L2PQ8NGH6 319 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 BLNKQ8WV28 456 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 MAP1LC3CQ9BXW4 147 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 FAM186AA6NE01 2351 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 H3BQ15 152 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 SPINK4O60575 86 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 GAPDHP04406 335 aaKnown RBP11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 VSIG8P0DPA2 414 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 FSTP19883 344 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 PMELP40967 661 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 PCOLCEQ15113 449 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 CBLN2Q8IUK8 224 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 TMEM204Q9BSN7 226 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 RNF115Q9Y4L5 304 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 BRCA1P38398 1863 aaKnown RBP11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 WISP3O95389 354 aaPredicted RBP11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 CXorf1O96002 111 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 HERVK_113P61574 105 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 GABRA6Q16445 453 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 HIST3H3Q16695 136 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 OVCH2Q7RTZ1 564 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 PPP1R3EQ9H7J1 279 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 MSL2Q9HCI7 577 aa11.59□□□□□ -0.55
SMARCA4-216ENST00000591545 ZNF250P15622 560 aa11.58□□□□□ -0.55
SMARCA4-216ENST00000591545 ZP4Q12836 540 aa11.58□□□□□ -0.55
SMARCA4-216ENST00000591545 FDCSPQ8NFU4 85 aa11.58□□□□□ -0.55
SMARCA4-216ENST00000591545 SPSB2Q99619 263 aa11.58□□□□□ -0.55
SMARCA4-216ENST00000591545 RPL36A-HNRNPH2H7BZ11 118 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 IFNL4K9M1U5 179 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 DNASE2O00115 360 aaPredicted RBP11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 GEMIN2O14893 280 aaKnown RBP11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 P01737 135 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 CAMPP49913 170 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 ZNF658BQ4V348 819 aaPredicted RBP11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 RSRP1Q9BUV0 290 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 NPTNQ9Y639 398 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 ICE1Q9Y2F5 2266 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 IFI6P09912 130 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 PPOXP50336 477 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 VAX1Q5SQQ9 334 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 NCMAPQ5T1S8 102 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 PPP1R32Q7Z5V6 425 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 H1FOOQ8IZA3 346 aaPredicted RBP11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 SHISA5Q8N114 240 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 GUCD1Q96NT3 240 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 TRAV8-7A0A075B6U6 113 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 ZNF205O95201 554 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 IGF2P01344 180 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 LYZP61626 148 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 OR1L6Q8NGR2 347 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 OR10AC1Q8NH08 325 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 HSPB8Q9UJY1 196 aa11.58□□□□□ -0.56
SMARCA4-216ENST00000591545 UPK3AO75631 287 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM27BQ5VT28 67 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 TGIF2LYQ8IUE0 185 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 TGIF2LXQ8IUE1 241 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 TMEM116Q8NCL8 245 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 OR2J1Q9GZK6 312 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 TRAV34A0A0B4J273 112 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 A6NDN8 102 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 ISLRO14498 428 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 PTP4A3O75365 173 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 TTRP02766 147 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 ATP5J2P56134 94 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 PRSS12P56730 875 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 SERF2P84101 59 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 PSG5Q15238 335 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 ZNF519Q8TB69 540 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 TXNDC17Q9BRA2 123 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 PIMREGQ9BSJ6 248 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 PCGF1Q9BSM1 259 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 SF3B6Q9Y3B4 125 aaKnown RBP11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 SCN3AQ9NY46 2000 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 CNOT1A5YKK6 2376 aaKnown RBP11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 SMPD2O60906 423 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 CCL8P80075 99 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 ABHD14BQ96IU4 210 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 CCL28Q9NRJ3 127 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 INSIG2Q9Y5U4 225 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 RLFQ13129 1914 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 ADRA2AP08913 450 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 ORM2P19652 201 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 FDX2Q6P4F2 183 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 C5orf17Q8NAS9 161 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 SNX22Q96L94 193 aa11.57□□□□□ -0.56
SMARCA4-216ENST00000591545 MED19A0JLT2 244 aaPredicted RBP11.56□□□□□ -0.56
SMARCA4-216ENST00000591545 ZNF98A6NK75 572 aa11.56□□□□□ -0.56
SMARCA4-216ENST00000591545 HIST1H1EP10412 219 aaKnown RBP11.56□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM3BP58499 235 aaPredicted RBP11.56□□□□□ -0.56
SMARCA4-216ENST00000591545 ISOC2Q96AB3 205 aa11.56□□□□□ -0.56
SMARCA4-216ENST00000591545 PTPRFP10586 1907 aa11.56□□□□□ -0.56
SMARCA4-216ENST00000591545 EP300Q09472 2414 aaPredicted RBP11.56□□□□□ -0.56
SMARCA4-216ENST00000591545 F5H697 171 aa11.56□□□□□ -0.56
SMARCA4-216ENST00000591545 RPL30P62888 115 aaKnown RBP11.56□□□□□ -0.56
SMARCA4-216ENST00000591545 TNXAQ16473 311 aa11.56□□□□□ -0.56
SMARCA4-216ENST00000591545 VWCEQ96DN2 955 aa11.56□□□□□ -0.56
SMARCA4-216ENST00000591545 NKX2-6A6NCS4 301 aa11.56□□□□□ -0.56
SMARCA4-216ENST00000591545 IGKV1D-16P01601 117 aa11.56□□□□□ -0.56
SMARCA4-216ENST00000591545 PRSS1P07477 247 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms