RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 MRPL41Q8IXM3 137 aaKnown RBP8.22□□□□□ -1.09
VPS4B-207ENST00000591519 COMMD1Q8N668 190 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 DRAM1Q8N682 238 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 NKAIN3Q8N8D7 197 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 OR56B4Q8NH76 319 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 TOMM40LQ969M1 308 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 YTHDF1Q9BYJ9 559 aaKnown RBP8.22□□□□□ -1.09
VPS4B-207ENST00000591519 GPR61Q9BZJ8 451 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 IL36GQ9NZH8 169 aa8.22□□□□□ -1.09
VPS4B-207ENST00000591519 AK6Q9Y3D8 172 aaKnown RBP8.22□□□□□ -1.09
VPS4B-207ENST00000591519 TRAV39A0A0B4J263 110 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 WI2-2373I1.2A0A1W2PRP0 233 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 SMIM30A4D0T7 59 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 SC5DO75845 299 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 GTF2F2P13984 249 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 TMEM11P17152 192 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 GLP1RP43220 463 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 RPL23AP62750 156 aaKnown RBP8.21□□□□□ -1.1
VPS4B-207ENST00000591519 ZNF816Q0VGE8 651 aaPredicted RBP8.21□□□□□ -1.1
VPS4B-207ENST00000591519 TRAM1Q15629 374 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 C9orf152Q5JTZ5 239 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 UBE2UQ5VVX9 321 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 GLT8D1Q68CQ7 371 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 OR10K2Q6IF99 312 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 ZNF329Q86UD4 541 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 LINC00311Q8N616 119 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 C8orf31Q8N9H6 132 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 SUMF2Q8NBJ7 301 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 TMEM104Q8NE00 496 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 OR51D1Q8NGF3 324 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 OR52M1Q8NGK5 317 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 RFESDQ8TAC1 157 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 PLPPR1Q8TBJ4 325 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 NEK7Q8TDX7 302 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 LEAP2Q969E1 77 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 CYYR1Q96J86 154 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 MCRIP2Q9BUT9 160 aaKnown RBP8.21□□□□□ -1.1
VPS4B-207ENST00000591519 SELENOIQ9C0D9 397 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 PLGRKTQ9HBL7 147 aa8.21□□□□□ -1.1
VPS4B-207ENST00000591519 CCRL2O00421 344 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 MRPS14O60783 128 aaKnown RBP8.2□□□□□ -1.1
VPS4B-207ENST00000591519 ZNF780AO75290 641 aaPredicted RBP8.2□□□□□ -1.1
VPS4B-207ENST00000591519 ARL6IP5O75915 188 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 IGHV3-7P01780 117 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 GAPDHP04406 335 aaKnown RBP8.2□□□□□ -1.1
VPS4B-207ENST00000591519 MGMTP16455 207 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 PSMA1P25786 263 aaKnown RBP8.2□□□□□ -1.1
VPS4B-207ENST00000591519 MYCNOSP40205 109 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 CLDN12P56749 244 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 GPR176Q14439 515 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 LTC4SQ16873 150 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 DEFB121Q5J5C9 76 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 C22orf42Q6IC83 251 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 OR2W3Q7Z3T1 314 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 LINC00596Q86U02 117 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 Q8N6K4 173 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 MRGPRDQ8TDS7 321 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 CCDC107Q8WV48 283 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 PHYHIPQ92561 330 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 ST6GALNAC6Q969X2 333 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 NOL4LQ96MY1 436 aaPredicted RBP8.2□□□□□ -1.1
VPS4B-207ENST00000591519 P2RX4Q99571 388 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 GFI1Q99684 422 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 UQCC2Q9BRT2 126 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 DPCDQ9BVM2 203 aaPredicted RBP8.2□□□□□ -1.1
VPS4B-207ENST00000591519 NDUFB11Q9NX14 153 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 COL7A1Q02388 2944 aa8.2□□□□□ -1.1
VPS4B-207ENST00000591519 IGHV1-3A0A0C4DH29 117 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 SERPINE3A8MV23 424 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 C15orf65H3BRN8 121 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 ORC5O43913 435 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 IGKV1D-33P01593 117 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 IGKV1-33P01594 117 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 MYL9P24844 172 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 HTR2CP28335 458 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 SSTR5P35346 364 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 SLC35B1P78383 322 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 HES1Q14469 280 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 HNF4GQ14541 408 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 RAB11BQ15907 218 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 MPV17LQ2QL34 196 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 Q3ZCU0 254 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 KHDC1LQ5JSQ8 128 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 HES5Q5TA89 166 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 SLC35E3Q7Z769 313 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 LYPD6Q86Y78 171 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 TGIF2LXQ8IUE1 241 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 FOXRED2Q8IWF2 684 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 CDH26Q8IXH8 852 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 IZUMO1Q8IYV9 350 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 STPG2Q8N412 459 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 OR10X1Q8NGY0 326 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 UBALD1Q8TB05 177 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 FCGR1BQ92637 280 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 EAF1Q96JC9 268 aaPredicted RBP8.19□□□□□ -1.1
VPS4B-207ENST00000591519 ABCG5Q9H222 651 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 PLSCR3Q9NRY6 295 aa8.19□□□□□ -1.1
VPS4B-207ENST00000591519 ZMAT5Q9UDW3 170 aaKnown RBP8.19□□□□□ -1.1
VPS4B-207ENST00000591519 TRDV1A0A1B0GX56 115 aa8.18□□□□□ -1.1
VPS4B-207ENST00000591519 SHISA3A0PJX4 238 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms