RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 OR13F1Q8NGS4 319 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 OR10R2Q8NGX6 335 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 TAF15Q92804 592 aaKnown RBP eCLIP9.58□□□□□ -0.88
LIG3-213ENST00000590630 GALMQ96C23 342 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 OCSTAMPQ9BR26 566 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 OR2S2Q9NQN1 319 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 ABRACLQ9P1F3 81 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 JPT1Q9UK76 154 aa9.58□□□□□ -0.88
LIG3-213ENST00000590630 IGHV3-43A0A0B4J1X8 118 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 CLPSL1A2RUU4 121 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 A6NDX4 124 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 SERPINE3A8MV23 424 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 TSPAN9O75954 239 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 SCGNO76038 276 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 RGS11O94810 467 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 CLEC2LP0C7M8 214 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 IGHV3-43DP0DP04 118 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 HIST1H1DP16402 221 aaKnown RBP9.57□□□□□ -0.88
LIG3-213ENST00000590630 MDKP21741 143 aaPredicted RBP9.57□□□□□ -0.88
LIG3-213ENST00000590630 IL3RAP26951 378 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 MRPS15P82914 257 aaKnown RBP9.57□□□□□ -0.88
LIG3-213ENST00000590630 ARL6IP1Q15041 203 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 MOGAT2Q3SYC2 334 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 Q6ZPA2 131 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 Q6ZSV7 163 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 SLC25A48Q6ZT89 311 aaKnown RBP9.57□□□□□ -0.88
LIG3-213ENST00000590630 OR8H3Q8N146 312 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 DTX3Q8N9I9 347 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 ZNF439Q8NDP4 499 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 OR4C13Q8NGP0 309 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 LGALS14Q8TCE9 139 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 CMSS1Q9BQ75 279 aaKnown RBP9.57□□□□□ -0.88
LIG3-213ENST00000590630 HDHD3Q9BSH5 251 aaPredicted RBP9.57□□□□□ -0.88
LIG3-213ENST00000590630 FUNDC2Q9BWH2 189 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 MRPS26Q9BYN8 205 aaKnown RBP9.57□□□□□ -0.88
LIG3-213ENST00000590630 NPFFR1Q9GZQ6 430 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 ATG5Q9H1Y0 275 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 C16orf95Q9H693 158 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 RANBP3Q9H6Z4 567 aaPredicted RBP9.57□□□□□ -0.88
LIG3-213ENST00000590630 KCNK7Q9Y2U2 307 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 ETV7Q9Y603 341 aa9.57□□□□□ -0.88
LIG3-213ENST00000590630 A0A1W2PPE3 182 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 MFNGO00587 321 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 HSD17B6O14756 317 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 CHST1O43916 411 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 CD3GP09693 182 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 SNRPBP14678 240 aaKnown RBP9.56□□□□□ -0.88
LIG3-213ENST00000590630 ZNF137PP52743 207 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 MORN2Q502X0 79 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 LY6G6FQ5SQ64 297 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 IDNKQ5T6J7 187 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 OLFML2AQ68BL7 652 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 CCBE1Q6UXH8 406 aaPredicted RBP9.56□□□□□ -0.88
LIG3-213ENST00000590630 C16orf82Q7Z2V1 217 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 TMEM219Q86XT9 240 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 OR10V1Q8NGI7 309 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 LINC01006Q8NI28 216 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 SETD6Q8TBK2 473 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 IL1F10Q8WWZ1 152 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 AKR1E2Q96JD6 320 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 ZNF747Q9BV97 191 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 Q9N2K0 584 aa9.56□□□□□ -0.88
LIG3-213ENST00000590630 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.56□□□□□ -0.88
LIG3-213ENST00000590630 PKD1L1Q8TDX9 2849 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 A0A1W2PPI3 338 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 TIMM23O14925 209 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 TXNL1O43396 289 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 YPEL1O60688 119 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 GAPDHP04406 335 aaKnown RBP9.55□□□□□ -0.88
LIG3-213ENST00000590630 LPLP06858 475 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 FAM106CPP0CH98 169 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 GNB3P16520 340 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 PPP1CCP36873 323 aaKnown RBP9.55□□□□□ -0.88
LIG3-213ENST00000590630 ZNF134P52741 427 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 LSM3P62310 102 aaKnown RBP9.55□□□□□ -0.88
LIG3-213ENST00000590630 HLA-DRB3P79483 266 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 ZNF816Q0VGE8 651 aaPredicted RBP9.55□□□□□ -0.88
LIG3-213ENST00000590630 GNMTQ14749 295 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 CT45A1Q5HYN5 189 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 FAM53AQ6NSI3 398 aaPredicted RBP9.55□□□□□ -0.88
LIG3-213ENST00000590630 THNSL2Q86YJ6 484 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 OR52L2PQ8NGH6 319 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 CT45A3Q8NHU0 189 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 ST6GALNAC6Q969X2 333 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 YPEL2Q96QA6 119 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 ABHD14AQ9BUJ0 271 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 RHBDL2Q9NX52 303 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 RNF114Q9Y508 228 aa9.55□□□□□ -0.88
LIG3-213ENST00000590630 A0A075B6Q4 140 aa9.54□□□□□ -0.88
LIG3-213ENST00000590630 FAM90A9PA6NNJ1 464 aa9.54□□□□□ -0.88
LIG3-213ENST00000590630 HAX1O00165 279 aa9.54□□□□□ -0.88
LIG3-213ENST00000590630 SLC31A2O15432 143 aa9.54□□□□□ -0.88
LIG3-213ENST00000590630 FCGR3AP08637 254 aa9.54□□□□□ -0.88
LIG3-213ENST00000590630 ZBTB25P24278 435 aa9.54□□□□□ -0.88
LIG3-213ENST00000590630 CD24P25063 80 aa9.54□□□□□ -0.88
LIG3-213ENST00000590630 TGFBR1P36897 503 aa9.54□□□□□ -0.88
LIG3-213ENST00000590630 RPS19P39019 145 aaKnown RBP9.54□□□□□ -0.88
LIG3-213ENST00000590630 KIR2DS4P43632 304 aa9.54□□□□□ -0.88
LIG3-213ENST00000590630 DIAPH2-AS1Q14236 149 aa9.54□□□□□ -0.88
LIG3-213ENST00000590630 HABP2Q14520 560 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms