RNA–Protein interactions for RNA: ENST00000590559.2

CLIP3-204, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 4

Gene CLIP3, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-204ENST00000590559 INSL3P51460 131 aa9.12□□□□□ -0.95
CLIP3-204ENST00000590559 LSAMPQ13449 338 aa9.12□□□□□ -0.95
CLIP3-204ENST00000590559 SLC22A6Q4U2R8 563 aa9.12□□□□□ -0.95
CLIP3-204ENST00000590559 MORN2Q502X0 79 aa9.12□□□□□ -0.95
CLIP3-204ENST00000590559 C19orf54Q5BKX5 351 aa9.12□□□□□ -0.95
CLIP3-204ENST00000590559 ATAD3CQ5T2N8 411 aa9.12□□□□□ -0.95
CLIP3-204ENST00000590559 SYT6Q5T7P8 510 aaPredicted RBP9.12□□□□□ -0.95
CLIP3-204ENST00000590559 DMKNQ6E0U4 476 aaPredicted RBP9.12□□□□□ -0.95
CLIP3-204ENST00000590559 SIGIRRQ6IA17 410 aa9.12□□□□□ -0.95
CLIP3-204ENST00000590559 OR13C5Q8NGS8 318 aa9.12□□□□□ -0.95
CLIP3-204ENST00000590559 OR1L1Q8NH94 360 aa9.12□□□□□ -0.95
CLIP3-204ENST00000590559 MRPS24Q96EL2 167 aaKnown RBP9.12□□□□□ -0.95
CLIP3-204ENST00000590559 RITA1Q96K30 269 aa9.12□□□□□ -0.95
CLIP3-204ENST00000590559 PGLYRP3Q96LB9 341 aa9.12□□□□□ -0.95
CLIP3-204ENST00000590559 RDH12Q96NR8 316 aa9.12□□□□□ -0.95
CLIP3-204ENST00000590559 GNB4Q9HAV0 340 aa9.12□□□□□ -0.95
CLIP3-204ENST00000590559 SPACA1Q9HBV2 294 aa9.12□□□□□ -0.95
CLIP3-204ENST00000590559 ZNF107Q9UII5 783 aaPredicted RBP9.12□□□□□ -0.95
CLIP3-204ENST00000590559 TRBV5-7A0A0A0MS05 114 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 FAM90A7PA6NKC0 464 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 FAM90A23PA8MXZ1 464 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 G3V318 75 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 SPINT2O43291 252 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 OR5H8P0DN80 308 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 FSTP19883 344 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 PPP3R1P63098 170 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 ADARB1P78563 741 aaKnown RBP9.11□□□□□ -0.95
CLIP3-204ENST00000590559 RIPK1Q13546 671 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 GPR176Q14439 515 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 ZNF260Q3ZCT1 412 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 LY6G6FQ5SQ64 297 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 CDH26Q8IXH8 852 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 MINDY2Q8NBR6 621 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 OR4K15Q8NH41 348 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 GHSRQ92847 366 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 ASCL2Q99929 193 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 C9orf16Q9BUW7 83 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 TPSG1Q9NRR2 321 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 BABAM2Q9NXR7 383 aa9.11□□□□□ -0.95
CLIP3-204ENST00000590559 IGHV7-81A0A0B4J1V7 117 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 MCRIP1C9JLW8 97 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 CA11O75493 328 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 NDUFA3O95167 84 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 GLAP06280 429 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 OR8U8P0C7N1 319 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 CNTFRP26992 372 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 CRIP2P52943 208 aaPredicted RBP9.1□□□□□ -0.95
CLIP3-204ENST00000590559 GNB1P62873 340 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 ZNF616Q08AN1 781 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 Q499Y3 187 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 YIF1BQ5BJH7 314 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 C6orf141Q5SZD1 244 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 C6orf183Q5T699 404 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 RAB12Q6IQ22 244 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 TRAT1Q6PIZ9 186 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 C5orf24Q7Z6I8 188 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 ZNF554Q86TJ5 538 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 STX19Q8N4C7 294 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 NPBQ8NG41 125 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 OR10V1Q8NGI7 309 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 NEK7Q8TDX7 302 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 Q96M66 194 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 S100A13Q99584 98 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 NABP2Q9BQ15 211 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 OR51J1Q9H342 316 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 RAB9BQ9NP90 201 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 ETAA1Q9NY74 926 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 GNG12Q9UBI6 72 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 CLEC2DQ9UHP7 191 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 TRAPPC2LQ9UL33 140 aa9.1□□□□□ -0.95
CLIP3-204ENST00000590559 DIMT1Q9UNQ2 313 aaKnown RBP9.1□□□□□ -0.95
CLIP3-204ENST00000590559 PLECQ15149 4684 aaKnown RBP9.09□□□□□ -0.95
CLIP3-204ENST00000590559 HYDINQ4G0P3 5121 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 ATP6V0E1O15342 81 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 SLC2A2P11168 524 aaPredicted RBP9.09□□□□□ -0.95
CLIP3-204ENST00000590559 RAB9AP51151 201 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 ACTBP60709 375 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 HTD2P86397 168 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 GNMTQ14749 295 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 MMDQ15546 238 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 CASC10Q5T4H9 136 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 GLIPR1L1Q6UWM5 242 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 TMPRSS11AQ6ZMR5 421 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 ZNF833PQ6ZTB9 187 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 ZNF429Q86V71 674 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 SBSPONQ8IVN8 264 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 OR1N2Q8NGR9 330 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 MRPL30Q8TCC3 161 aaKnown RBP9.09□□□□□ -0.95
CLIP3-204ENST00000590559 MUL1Q969V5 352 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 ANKRD60Q9BZ19 345 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 TAF9BQ9HBM6 251 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 OR2S2Q9NQN1 319 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 VSIG4Q9Y279 399 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 MRPS28Q9Y2Q9 187 aaKnown RBP9.09□□□□□ -0.95
CLIP3-204ENST00000590559 SMAD5-AS1Q9Y6J3 95 aa9.09□□□□□ -0.95
CLIP3-204ENST00000590559 BIRC6Q9NR09 4857 aa9.08□□□□□ -0.96
CLIP3-204ENST00000590559 SOX15O60248 233 aa9.08□□□□□ -0.96
CLIP3-204ENST00000590559 YPEL1O60688 119 aa9.08□□□□□ -0.96
CLIP3-204ENST00000590559 MGMTP16455 207 aa9.08□□□□□ -0.96
CLIP3-204ENST00000590559 FUT3P21217 361 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms