RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 CHATP28329 748 aa13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 OR3A3P47888 321 aa13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 RPS25P62851 125 aaKnown RBP13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 PLA2G7Q13093 441 aa13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 MED21Q13503 144 aa13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 DEFB136Q30KP8 78 aa13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 TMEM91Q6ZNR0 172 aa13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 C6orf201Q7Z4U5 140 aa13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 SLC35E3Q7Z769 313 aa13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 FAAP24Q9BTP7 215 aa13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 MRPL20Q9BYC9 149 aaKnown RBP13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 MBNL3Q9NUK0 354 aaKnown RBP13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 COL7A1Q02388 2944 aa13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 NCBP2LA6PVI3 153 aaKnown RBP13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 FGF16O43320 207 aa13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 RPLP1P05386 114 aaKnown RBP13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 FUT3P21217 361 aa13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 MAP2K4P45985 399 aa13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 ZNF137PP52743 207 aa13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 SLC35A2P78381 396 aa13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 GPR50Q13585 617 aa13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 GPR176Q14439 515 aa13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 P2RY14Q15391 338 aa13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 C1orf100Q5SVJ3 147 aa13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 LIPKQ5VXJ0 399 aa13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 STPG2Q8N412 459 aa13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 C8orf31Q8N9H6 132 aa13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 ERGIC3Q9Y282 383 aa13.23□□□□□ -0.29
CROCCP3-203ENST00000589964 LSAMPQ13449 338 aa13.22□□□□□ -0.29
CROCCP3-203ENST00000589964 SPHARQ15513 63 aa13.22□□□□□ -0.29
CROCCP3-203ENST00000589964 MORN2Q502X0 79 aa13.22□□□□□ -0.29
CROCCP3-203ENST00000589964 RBM48Q5RL73 367 aaKnown RBP13.22□□□□□ -0.29
CROCCP3-203ENST00000589964 CEACAM19Q7Z692 300 aa13.22□□□□□ -0.29
CROCCP3-203ENST00000589964 CDH26Q8IXH8 852 aa13.22□□□□□ -0.29
CROCCP3-203ENST00000589964 FAM71E2Q8N5Q1 922 aa13.22□□□□□ -0.29
CROCCP3-203ENST00000589964 MRPS24Q96EL2 167 aaKnown RBP13.22□□□□□ -0.29
CROCCP3-203ENST00000589964 UQCC2Q9BRT2 126 aa13.22□□□□□ -0.29
CROCCP3-203ENST00000589964 ABCG5Q9H222 651 aa13.22□□□□□ -0.29
CROCCP3-203ENST00000589964 H0YHG0 523 aa13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 SPINT2O43291 252 aa13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 UCHL1P09936 223 aa13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 SLC2A2P11168 524 aaPredicted RBP13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 THBS3P49746 956 aa13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 RPS27AP62979 156 aaKnown RBP13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 CFHR3Q02985 330 aa13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 TGIF2LXQ8IUE1 241 aa13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 NKAIN3Q8N8D7 197 aa13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 KLHL30-AS1Q8NEE0 82 aa13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 OR2T10Q8NGZ9 312 aa13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 RAX2Q96IS3 184 aa13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 S1PR3Q99500 378 aa13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 MND1Q9BWT6 205 aa13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 SPACA1Q9HBV2 294 aa13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 OR2S2Q9NQN1 319 aa13.21□□□□□ -0.29
CROCCP3-203ENST00000589964 FAM90A10PA6NDY2 464 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 FAM90A7PA6NKC0 464 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 TMEM14DPA8MWL7 114 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 FAM90A23PA8MXZ1 464 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 H3BUI4 141 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 SLC22A1O15245 554 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 SOCS1O15524 211 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 MOSP00540 346 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 CD37P11049 281 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 MYF6P23409 242 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 CD1BP29016 333 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 CLDN12P56749 244 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 MED22Q15528 200 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 HMGN3Q15651 99 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 C6orf183Q5T699 404 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 RNLSQ5VYX0 342 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 P2RX4Q99571 388 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 IFI27L2Q9H2X8 130 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 DUSP21Q9H596 190 aa13.2□□□□□ -0.3
CROCCP3-203ENST00000589964 SHISA3A0PJX4 238 aa13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 ST8SIA5O15466 376 aa13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 LANCL1O43813 399 aa13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 LINC00205P59089 165 aa13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 NDPQ00604 133 aa13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 C11orf87Q6NUJ2 197 aa13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 SVOPQ8N4V2 548 aa13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 CHPT1Q8WUD6 406 aa13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 NABP2Q9BQ15 211 aa13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 ABHD14AQ9BUJ0 271 aa13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 LPAR5Q9H1C0 372 aa13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 DCLRE1BQ9H816 532 aa13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 LIN7CQ9NUP9 197 aaKnown RBP13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 OR1A1Q9P1Q5 309 aa13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 ZNF107Q9UII5 783 aaPredicted RBP13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 AK6Q9Y3D8 172 aaKnown RBP13.19□□□□□ -0.3
CROCCP3-203ENST00000589964 SAA2-SAA4A0A096LPE2 208 aa13.18□□□□□ -0.3
CROCCP3-203ENST00000589964 FOXI3A8MTJ6 420 aaPredicted RBP13.18□□□□□ -0.3
CROCCP3-203ENST00000589964 NUDT19A8MXV4 375 aa13.18□□□□□ -0.3
CROCCP3-203ENST00000589964 NAPSAO96009 420 aa13.18□□□□□ -0.3
CROCCP3-203ENST00000589964 HSMCR30P0CW71 290 aa13.18□□□□□ -0.3
CROCCP3-203ENST00000589964 SAA2P0DJI9 122 aaPredicted RBP13.18□□□□□ -0.3
CROCCP3-203ENST00000589964 SRMP19623 302 aa13.18□□□□□ -0.3
CROCCP3-203ENST00000589964 MAPK3P27361 379 aaPredicted RBP13.18□□□□□ -0.3
CROCCP3-203ENST00000589964 FABP5Q01469 135 aa13.18□□□□□ -0.3
CROCCP3-203ENST00000589964 HSD17B12Q53GQ0 312 aa13.18□□□□□ -0.3
CROCCP3-203ENST00000589964 RPL39P5Q59GN2 51 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms