RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 LYSMD2Q8IV50 215 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 OR10V1Q8NGI7 309 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 OR13D1Q8NGV5 346 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 OR10J5Q8NHC4 309 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 LHX4Q969G2 390 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 SDHCQ99643 169 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-211ENST00000589753 NECAP2Q9NVZ3 263 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 TAS2R8Q9NYW2 309 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 SLC23A1Q9UHI7 598 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 ZNF107Q9UII5 783 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-211ENST00000589753 KIAA2026Q5HYC2 2103 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 TRBV6-7A0A0A0MS04 114 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 ZNF736B4DX44 427 aaPredicted RBP12.4□□□□□ -0.42
ATG4D-211ENST00000589753 RGS11O94810 467 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 PMP2P02689 132 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 COX7A1P24310 79 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 OR3A3P47888 321 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 PPP5CP53041 499 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 TAS2R19P59542 299 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 KLRD1Q13241 179 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 GNMTQ14749 295 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 CDK10Q15131 360 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 FAM53AQ6NSI3 398 aaPredicted RBP12.4□□□□□ -0.42
ATG4D-211ENST00000589753 C1orf229Q6ZS94 237 aaPredicted RBP12.4□□□□□ -0.42
ATG4D-211ENST00000589753 ABHD12Q8N2K0 398 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 PNKDQ8N490 385 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 TMEM229BQ8NBD8 167 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 OR5H2Q8NGV7 314 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 LEAP2Q969E1 77 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 TRIM63Q969Q1 353 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 GINS4Q9BRT9 223 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 CLEC7AQ9BXN2 247 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 OR1A1Q9P1Q5 309 aa12.4□□□□□ -0.42
ATG4D-211ENST00000589753 TEX15Q9BXT5 2789 aa12.4□□□□□ -0.43
ATG4D-211ENST00000589753 FLNAP21333 2647 aaKnown RBP12.4□□□□□ -0.43
ATG4D-211ENST00000589753 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.39□□□□□ -0.435e-7■■■■□ 20.9
ATG4D-211ENST00000589753 CREBBPQ92793 2442 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 IGHV2-26A0A0B4J1V2 119 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 TRAV40A0A0B4J280 105 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 RNASEK-C17orf49H0YIS7 233 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 YPEL1O60688 119 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 IGHV3-7P01780 117 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 CD34P28906 385 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 CD40LGP29965 261 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 HRH1P35367 487 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 PPP1CCP36873 323 aaKnown RBP12.39□□□□□ -0.43
ATG4D-211ENST00000589753 CEACAM6P40199 344 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 BAK1Q16611 211 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 Q3ZCU0 254 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 MORN2Q502X0 79 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 ACTBL2Q562R1 376 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 UTF1Q5T230 341 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 TRIQKQ629K1 86 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 HCP5Q6MZN7 132 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 PDZD9Q8IXQ8 264 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 TEX29Q8N6K0 151 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 OR9G1Q8NH87 305 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 YPEL2Q96QA6 119 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 TSC22D3Q99576 134 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 CCDC32Q9BV29 185 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 PSG11Q9UQ72 335 aa12.39□□□□□ -0.43
ATG4D-211ENST00000589753 CENPVL3A0A0U1RRI6 287 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 ANKRD20A5PA0PJZ0 165 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 CD3DP04234 171 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 OR5H8P0DN80 308 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 TBPP20226 339 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 RFX2P48378 723 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 INPP1P49441 399 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 GNG10P50151 68 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 UBE2E1P51965 193 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 RNASE10Q5GAN6 216 aaKnown RBP12.38□□□□□ -0.43
ATG4D-211ENST00000589753 LY6G6FQ5SQ64 297 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 FAM120AOSQ5T036 256 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 GPR157Q5UAW9 335 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 OVCH2Q7RTZ1 564 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 TOMM5Q8N4H5 51 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 OR11H6Q8NGC7 330 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 NANPQ8TBE9 248 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 TOLLIPQ9H0E2 274 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 GSX1Q9H4S2 264 aaPredicted RBP12.38□□□□□ -0.43
ATG4D-211ENST00000589753 TMEM160Q9NX00 188 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 RDH8Q9NYR8 311 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 EHFQ9NZC4 300 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 ZNF69Q9UC07 566 aa12.38□□□□□ -0.43
ATG4D-211ENST00000589753 IGHV3OR16-10A0A075B7F0 116 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 IGHV1-69DA0A0B4J2H0 117 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 A0A1W2PPE3 182 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 J3QR06 171 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 J3QRK9 145 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 M0QYG6 137 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 TOR1AO14656 332 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 IGHV1-69P01742 117 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 CD74P04233 296 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 ARG1P05089 322 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 AKAIN1P0CW23 69 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 IGHV4-38-2P0DP08 117 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 IL7P13232 177 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 PRRX1P54821 245 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 AP3S2P59780 193 aa12.37□□□□□ -0.43
ATG4D-211ENST00000589753 DYRK1AQ13627 763 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms