RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 LRRC45Q96CN5 670 aa1.58□□□□□ -2.16
SMAD4-207ENST00000589076 MED10Q9BTT4 135 aa1.58□□□□□ -2.16
SMAD4-207ENST00000589076 TSSK6Q9BXA6 273 aa1.58□□□□□ -2.16
SMAD4-207ENST00000589076 ARL6Q9H0F7 186 aa1.58□□□□□ -2.16
SMAD4-207ENST00000589076 ALX4Q9H161 411 aaPredicted RBP1.58□□□□□ -2.16
SMAD4-207ENST00000589076 CHMP4BQ9H444 224 aaKnown RBP1.58□□□□□ -2.16
SMAD4-207ENST00000589076 PHLDA3Q9Y5J5 127 aa1.58□□□□□ -2.16
SMAD4-207ENST00000589076 URGCP-MRPS24S4R325 110 aa1.58□□□□□ -2.16
SMAD4-207ENST00000589076 MEGF8Q7Z7M0 2845 aa1.58□□□□□ -2.16
SMAD4-207ENST00000589076 SHANK3Q9BYB0 1731 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 MYO9BQ13459 2157 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 A0A1W2PNM2 257 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 MKRN2OSH3BPM6 223 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 LIN7AO14910 233 aaPredicted RBP1.57□□□□□ -2.16
SMAD4-207ENST00000589076 LECT2O14960 151 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 DENRO43583 198 aaKnown RBP1.57□□□□□ -2.16
SMAD4-207ENST00000589076 SYNGR1O43759 233 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 EPPINO95925 133 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 NPPAP01160 153 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 LTAP01374 205 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 ACTR1BP42025 376 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 SLAMF1Q13291 335 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 APOFQ13790 326 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 CST6Q15828 149 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 EXOC3L4Q17RC7 722 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 MTERF4Q7Z6M4 381 aaKnown RBP1.57□□□□□ -2.16
SMAD4-207ENST00000589076 OR4P4Q8NGL7 312 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 OR5AK3PQ8NH89 298 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 ANGPTL6Q8NI99 470 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 GALMQ96C23 342 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 ASCL3Q9NQ33 180 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 SLC23A2Q9UGH3 650 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 TRPM6Q9BX84 2022 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 BRD4O60885 1362 aaPredicted RBP1.57□□□□□ -2.16
SMAD4-207ENST00000589076 COL24A1Q17RW2 1714 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 AKAP13Q12802 2813 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 PCNX2A6NKB5 2137 aa1.57□□□□□ -2.16
SMAD4-207ENST00000589076 CEP295Q9C0D2 2601 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 OTOFQ9HC10 1997 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 LRP5O75197 1615 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 ERICH4A6NGS2 130 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 C9J4A7 227 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 J3QRE1 110 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 SCN2BO60939 215 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 RAB36O95755 333 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 CTSGP08311 255 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 SYT1P21579 422 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 CRABP1P29762 137 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 CASQ1P31415 396 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 KDELR2P33947 212 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 RAB8AP61006 207 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 FAM3AP98173 230 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 GTF2BQ00403 316 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 TTC33Q6PID6 262 aaPredicted RBP1.56□□□□□ -2.16
SMAD4-207ENST00000589076 TCF23Q7RTU1 214 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 VN1R4Q7Z5H5 301 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 SPATA24Q86W54 205 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 CRLF3Q8IUI8 442 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 ZBTB8OSQ8IWT0 167 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 SELENOHQ8IZQ5 122 aaKnown RBP1.56□□□□□ -2.16
SMAD4-207ENST00000589076 ATP6V1C2Q8NEY4 427 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 OR5D18Q8NGL1 313 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 OR9I1Q8NGQ6 314 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 RNASEH2CQ8TDP1 164 aaKnown RBP1.56□□□□□ -2.16
SMAD4-207ENST00000589076 ZCCHC13Q8WW36 166 aaKnown RBP1.56□□□□□ -2.16
SMAD4-207ENST00000589076 OR8B2Q96RD0 313 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 MS4A12Q9NXJ0 267 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 CD300AQ9UGN4 299 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 FBXL3Q9UKT7 428 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 TMEM94Q12767 1356 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 MYO16Q9Y6X6 1858 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 BSNQ9UPA5 3926 aa1.56□□□□□ -2.16
SMAD4-207ENST00000589076 ATG2BQ96BY7 2078 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 FAT4Q6V0I7 4981 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 TRPC5OSA6NMA1 111 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 F5H5K5 113 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 G3V3Q6 166 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 FBP1P09467 338 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 OR12D1P0DN82 309 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 CTSEP14091 401 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 ZNF22P17026 224 aaPredicted RBP1.55□□□□□ -2.16
SMAD4-207ENST00000589076 GADD45AP24522 165 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 FUSP35637 526 aaKnown RBP eCLIP1.55□□□□□ -2.16
SMAD4-207ENST00000589076 STC1P52823 247 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 DLX6P56179 175 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 DYNLL1P63167 89 aaKnown RBP1.55□□□□□ -2.16
SMAD4-207ENST00000589076 HENMT1Q5T8I9 393 aaKnown RBP1.55□□□□□ -2.16
SMAD4-207ENST00000589076 CLEC6AQ6EIG7 209 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 SLC13A5Q86YT5 568 aaPredicted RBP1.55□□□□□ -2.16
SMAD4-207ENST00000589076 OR11L1Q8NGX0 322 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 CD200R1Q8TD46 325 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 LMX1AQ8TE12 382 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 TAMM41Q96BW9 452 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 ATP6V1G3Q96LB4 118 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 TMEM56Q96MV1 263 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 FAM210AQ96ND0 272 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 POTEKPQ9BYX7 375 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 CHST5Q9GZS9 411 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 ZNF286AQ9HBT8 521 aa1.55□□□□□ -2.16
SMAD4-207ENST00000589076 C1orf109Q9NX04 203 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms