RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CROCCP3Q8IVE0 287 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 LINC00311Q8N616 119 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 C8orf31Q8N9H6 132 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 OR52L2PQ8NGH6 319 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 OR10V1Q8NGI7 309 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 SETD6Q8TBK2 473 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 SLC25A46Q96AG3 418 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 CREB3L1Q96BA8 519 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 Q9N2K0 584 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 ELF5Q9UKW6 265 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-207ENST00000588542 SPATA2Q9UM82 520 aa16.28■□□□□ 0.2
DDX39A-207ENST00000588542 A0A075B6Q4 140 aa16.27■□□□□ 0.2
DDX39A-207ENST00000588542 POM121CA8CG34 1229 aa16.27■□□□□ 0.2
DDX39A-207ENST00000588542 SLC31A2O15432 143 aa16.27■□□□□ 0.2
DDX39A-207ENST00000588542 CEACAM3P40198 252 aa16.27■□□□□ 0.2
DDX39A-207ENST00000588542 ZNF134P52741 427 aa16.27■□□□□ 0.2
DDX39A-207ENST00000588542 RPL15P61313 204 aaKnown RBP16.27■□□□□ 0.2
DDX39A-207ENST00000588542 RELBQ01201 579 aa16.27■□□□□ 0.2
DDX39A-207ENST00000588542 GNMTQ14749 295 aa16.27■□□□□ 0.2
DDX39A-207ENST00000588542 SPATA3Q8NHX4 192 aa16.27■□□□□ 0.2
DDX39A-207ENST00000588542 GCDHQ92947 438 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-207ENST00000588542 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.27■□□□□ 0.2
DDX39A-207ENST00000588542 C1RLQ9NZP8 487 aa16.27■□□□□ 0.2
DDX39A-207ENST00000588542 ABRACLQ9P1F3 81 aa16.27■□□□□ 0.2
DDX39A-207ENST00000588542 GNG12Q9UBI6 72 aa16.27■□□□□ 0.2
DDX39A-207ENST00000588542 AMMECR1Q9Y4X0 333 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-207ENST00000588542 CD3GP09693 182 aa16.26■□□□□ 0.19
DDX39A-207ENST00000588542 COMPP49747 757 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-207ENST00000588542 DIAPH2-AS1Q14236 149 aa16.26■□□□□ 0.19
DDX39A-207ENST00000588542 CDNFQ49AH0 187 aa16.26■□□□□ 0.19
DDX39A-207ENST00000588542 MORN2Q502X0 79 aa16.26■□□□□ 0.19
DDX39A-207ENST00000588542 CT45A1Q5HYN5 189 aa16.26■□□□□ 0.19
DDX39A-207ENST00000588542 CCBE1Q6UXH8 406 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-207ENST00000588542 SLC25A48Q6ZT89 311 aaKnown RBP16.26■□□□□ 0.19
DDX39A-207ENST00000588542 CT45A3Q8NHU0 189 aa16.26■□□□□ 0.19
DDX39A-207ENST00000588542 GALMQ96C23 342 aa16.26■□□□□ 0.19
DDX39A-207ENST00000588542 OCSTAMPQ9BR26 566 aa16.26■□□□□ 0.19
DDX39A-207ENST00000588542 OR2S2Q9NQN1 319 aa16.26■□□□□ 0.19
DDX39A-207ENST00000588542 JPT1Q9UK76 154 aa16.26■□□□□ 0.19
DDX39A-207ENST00000588542 SERPINE3A8MV23 424 aa16.25■□□□□ 0.19
DDX39A-207ENST00000588542 OOSP1A8MZH6 123 aa16.25■□□□□ 0.19
DDX39A-207ENST00000588542 PPP1CCP36873 323 aaKnown RBP16.25■□□□□ 0.19
DDX39A-207ENST00000588542 HLA-DRB3P79483 266 aa16.25■□□□□ 0.19
DDX39A-207ENST00000588542 MADCAM1Q13477 382 aa16.25■□□□□ 0.19
DDX39A-207ENST00000588542 OR10X1Q8NGY0 326 aa16.25■□□□□ 0.19
DDX39A-207ENST00000588542 ABCB10Q9NRK6 738 aa16.25■□□□□ 0.19
DDX39A-207ENST00000588542 MGAT4AQ9UM21 535 aa16.25■□□□□ 0.19
DDX39A-207ENST00000588542 TCF19Q9Y242 345 aa16.25■□□□□ 0.19
DDX39A-207ENST00000588542 A6NDX4 124 aa16.24■□□□□ 0.19
DDX39A-207ENST00000588542 YPEL1O60688 119 aa16.24■□□□□ 0.19
DDX39A-207ENST00000588542 SCGNO76038 276 aa16.24■□□□□ 0.19
DDX39A-207ENST00000588542 FCGR3AP08637 254 aa16.24■□□□□ 0.19
DDX39A-207ENST00000588542 SCTP09683 121 aa16.24■□□□□ 0.19
DDX39A-207ENST00000588542 ZNF260Q3ZCT1 412 aa16.24■□□□□ 0.19
DDX39A-207ENST00000588542 FBLN7Q53RD9 439 aa16.24■□□□□ 0.19
DDX39A-207ENST00000588542 LY6G6FQ5SQ64 297 aa16.24■□□□□ 0.19
DDX39A-207ENST00000588542 IL1F10Q8WWZ1 152 aa16.24■□□□□ 0.19
DDX39A-207ENST00000588542 TOMM40LQ969M1 308 aa16.24■□□□□ 0.19
DDX39A-207ENST00000588542 ST6GALNAC6Q969X2 333 aa16.24■□□□□ 0.19
DDX39A-207ENST00000588542 YPEL2Q96QA6 119 aa16.24■□□□□ 0.19
DDX39A-207ENST00000588542 A0A1W2PPI3 338 aa16.23■□□□□ 0.19
DDX39A-207ENST00000588542 CHST1O43916 411 aa16.23■□□□□ 0.19
DDX39A-207ENST00000588542 NDUFA7O95182 113 aa16.23■□□□□ 0.19
DDX39A-207ENST00000588542 CRYBA1P05813 215 aa16.23■□□□□ 0.19
DDX39A-207ENST00000588542 RPL5P46777 297 aaKnown RBP16.23■□□□□ 0.19
DDX39A-207ENST00000588542 FOXL1Q12952 345 aa16.23■□□□□ 0.19
DDX39A-207ENST00000588542 ARL6IP1Q15041 203 aa16.23■□□□□ 0.19
DDX39A-207ENST00000588542 AWAT1Q58HT5 328 aa16.23■□□□□ 0.19
DDX39A-207ENST00000588542 RPEQ96AT9 228 aa16.23■□□□□ 0.19
DDX39A-207ENST00000588542 ZNF230Q9UIE0 474 aaPredicted RBP16.23■□□□□ 0.19
DDX39A-207ENST00000588542 IGKV1-6A0A0C4DH72 117 aa16.22■□□□□ 0.19
DDX39A-207ENST00000588542 TRDCB7Z8K6 153 aa16.22■□□□□ 0.19
DDX39A-207ENST00000588542 GSTP1P09211 210 aaKnown RBP16.22■□□□□ 0.19
DDX39A-207ENST00000588542 CD24P25063 80 aa16.22■□□□□ 0.19
DDX39A-207ENST00000588542 ZNF137PP52743 207 aa16.22■□□□□ 0.19
DDX39A-207ENST00000588542 MRPS15P82914 257 aaKnown RBP16.22■□□□□ 0.19
DDX39A-207ENST00000588542 ZNF816Q0VGE8 651 aaPredicted RBP16.22■□□□□ 0.19
DDX39A-207ENST00000588542 ARFRP1Q13795 201 aa16.22■□□□□ 0.19
DDX39A-207ENST00000588542 HACD4Q5VWC8 232 aa16.22■□□□□ 0.19
DDX39A-207ENST00000588542 STEAP3Q658P3 488 aa16.22■□□□□ 0.19
DDX39A-207ENST00000588542 CCDC144NLQ6NUI1 221 aa16.22■□□□□ 0.19
DDX39A-207ENST00000588542 LIAT1Q6ZQX7 453 aa16.22■□□□□ 0.19
DDX39A-207ENST00000588542 TMEM219Q86XT9 240 aa16.22■□□□□ 0.19
DDX39A-207ENST00000588542 CLVS1Q8IUQ0 354 aaPredicted RBP16.22■□□□□ 0.19
DDX39A-207ENST00000588542 MAFIPQ8WZ33 124 aa16.22■□□□□ 0.19
DDX39A-207ENST00000588542 CFHR4Q92496 578 aa16.22■□□□□ 0.19
DDX39A-207ENST00000588542 KCTD12Q96CX2 325 aaKnown RBP16.22■□□□□ 0.19
DDX39A-207ENST00000588542 ABCG5Q9H222 651 aa16.22■□□□□ 0.19
DDX39A-207ENST00000588542 DCSTAMPQ9H295 470 aa16.22■□□□□ 0.19
DDX39A-207ENST00000588542 A0A0A6YYH2 397 aa16.21■□□□□ 0.19
DDX39A-207ENST00000588542 TMEM235A6NFC5 223 aa16.21■□□□□ 0.19
DDX39A-207ENST00000588542 A6NJ64 397 aa16.21■□□□□ 0.19
DDX39A-207ENST00000588542 HSD17B6O14756 317 aa16.21■□□□□ 0.19
DDX39A-207ENST00000588542 MDKP21741 143 aaPredicted RBP16.21■□□□□ 0.19
DDX39A-207ENST00000588542 BRS3P32247 399 aa16.21■□□□□ 0.19
DDX39A-207ENST00000588542 RAB7AP51149 207 aa16.21■□□□□ 0.19
DDX39A-207ENST00000588542 RAG2P55895 527 aa16.21■□□□□ 0.19
DDX39A-207ENST00000588542 HERPUD1Q15011 391 aa16.21■□□□□ 0.19
DDX39A-207ENST00000588542 DHRS7BQ6IAN0 325 aaPredicted RBP16.21■□□□□ 0.19
DDX39A-207ENST00000588542 Q6ZSV7 163 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms