RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 SLC2A9Q9NRM0 540 aa4.72□□□□□ -1.65
TPM4-210ENST00000588507 DCAF13Q9NV06 445 aaKnown RBP4.72□□□□□ -1.65
TPM4-210ENST00000588507 RHCGQ9UBD6 479 aa4.72□□□□□ -1.65
TPM4-210ENST00000588507 KIF25Q9UIL4 384 aa4.72□□□□□ -1.65
TPM4-210ENST00000588507 FAM223BA6NKX1 122 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 DBX1A6NMT0 343 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 ZNF593O00488 134 aaPredicted RBP4.71□□□□□ -1.66
TPM4-210ENST00000588507 SLC31A2O15432 143 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 CALCBP10092 127 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 PRKACAP17612 351 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 IGFBP3P17936 291 aaPredicted RBP4.71□□□□□ -1.66
TPM4-210ENST00000588507 PYCR1P32322 319 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 SSTR5P35346 364 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 RHOGP84095 191 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 SCN1BQ07699 218 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 KLF10Q13118 480 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 PCLAFQ15004 111 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 OXA1LQ15070 435 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 TEX30Q5JUR7 227 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 MSANTD1Q6ZTZ1 278 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 SLC25A26Q70HW3 274 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 FAM223AQ8IWN6 122 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 CCDC197Q8NCU1 140 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 OR52M1Q8NGK5 317 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 OR4K13Q8NH42 304 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 UBLCP1Q8WVY7 318 aaPredicted RBP4.71□□□□□ -1.66
TPM4-210ENST00000588507 GHSRQ92847 366 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 ERMAPQ96PL5 475 aaPredicted RBP4.71□□□□□ -1.66
TPM4-210ENST00000588507 RBFOX1Q9NWB1 397 aaKnown RBP4.71□□□□□ -1.66
TPM4-210ENST00000588507 CD300AQ9UGN4 299 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 GSTK1Q9Y2Q3 226 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 SH3GLB1Q9Y371 365 aa4.71□□□□□ -1.66
TPM4-210ENST00000588507 TRBV5-7A0A0A0MS05 114 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 TRBV2A0A0J9YWF9 115 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 FAM230AA0A1W2PPH8 454 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 TMEM189A5PLL7 270 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 SDCBPO00560 298 aaPredicted RBP4.7□□□□□ -1.66
TPM4-210ENST00000588507 SLC22A1O15245 554 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 ATP5HO75947 161 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 H2BFMP0C1H6 154 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 MYOD1P15172 320 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 ZNF44P15621 663 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 HIST1H1CP16403 213 aaKnown RBP4.7□□□□□ -1.66
TPM4-210ENST00000588507 PPIBP23284 216 aaKnown RBP4.7□□□□□ -1.66
TPM4-210ENST00000588507 EMP1P54849 157 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 RPL37AP61513 92 aaKnown RBP4.7□□□□□ -1.66
TPM4-210ENST00000588507 Q3ZCU0 254 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 SCXQ7RTU7 201 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 NFE4Q86UQ8 179 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 COMMD2Q86X83 199 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.7□□□□□ -1.66
TPM4-210ENST00000588507 RNF113BQ8IZP6 322 aaKnown RBP4.7□□□□□ -1.66
TPM4-210ENST00000588507 PROKR2Q8NFJ6 384 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 RNF133Q8WVZ7 376 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 GTF2H4Q92759 462 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 FAM46BQ96A09 425 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 C10orf35Q96D05 121 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 UPK3BQ9BT76 320 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 ROPN1BQ9BZX4 212 aaPredicted RBP4.7□□□□□ -1.66
TPM4-210ENST00000588507 GORASP2Q9H8Y8 452 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 FAM118AQ9NWS6 357 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 GFOD1Q9NXC2 390 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 HSF4Q9ULV5 492 aa4.7□□□□□ -1.66
TPM4-210ENST00000588507 PUS1Q9Y606 427 aaKnown RBP eCLIP4.7□□□□□ -1.66
TPM4-210ENST00000588507 ANKRD65E5RJM6 399 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 RGS16O15492 202 aaPredicted RBP4.69□□□□□ -1.66
TPM4-210ENST00000588507 SPP1P10451 314 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 TNFRSF1BP20333 461 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 BCL3P20749 454 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 GALP22466 123 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 ARL3P36405 182 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 OPRL1P41146 370 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 CRISP1P54107 249 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 RIPK1Q13546 671 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 TMEM42Q69YG0 159 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 STHQ8IWL8 128 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 CHST4Q8NCG5 386 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 CSNK1G2-AS1Q8NCQ2 148 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 OR51T1Q8NGJ9 327 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 TAMM41Q96BW9 452 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 FMO2Q99518 471 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 TMEM109Q9BVC6 243 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 MRPL20Q9BYC9 149 aaKnown RBP4.69□□□□□ -1.66
TPM4-210ENST00000588507 DPH3P1Q9H4G8 78 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 CLEC5AQ9NY25 188 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 SLC25A37Q9NYZ2 338 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 METTL1Q9UBP6 276 aaKnown RBP4.69□□□□□ -1.66
TPM4-210ENST00000588507 DKK2Q9UBU2 259 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 EXOSC1Q9Y3B2 195 aaKnown RBP4.69□□□□□ -1.66
TPM4-210ENST00000588507 SNX5Q9Y5X3 404 aa4.69□□□□□ -1.66
TPM4-210ENST00000588507 IGHV3-43A0A0B4J1X8 118 aa4.68□□□□□ -1.66
TPM4-210ENST00000588507 A0A0U1RQV5 110 aa4.68□□□□□ -1.66
TPM4-210ENST00000588507 SLC33A1O00400 549 aaPredicted RBP4.68□□□□□ -1.66
TPM4-210ENST00000588507 CTSDP07339 412 aaPredicted RBP4.68□□□□□ -1.66
TPM4-210ENST00000588507 IGHV3-43DP0DP04 118 aa4.68□□□□□ -1.66
TPM4-210ENST00000588507 GPX2P18283 190 aa4.68□□□□□ -1.66
TPM4-210ENST00000588507 GZMHP20718 246 aa4.68□□□□□ -1.66
TPM4-210ENST00000588507 GCAP28676 217 aa4.68□□□□□ -1.66
TPM4-210ENST00000588507 FMO3P31513 532 aa4.68□□□□□ -1.66
TPM4-210ENST00000588507 RASSF2P50749 326 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms