RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 KLRD1Q13241 179 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 LTC4SQ16873 150 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 TUSC1Q2TAM9 212 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 MORN2Q502X0 79 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 PYHIN1Q6K0P9 492 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 CNIH2Q6PI25 160 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 BRD3OSQ6XYD6 125 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 HOGA1Q86XE5 327 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 TMEM86BQ8N661 226 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 OR10X1Q8NGY0 326 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 OR1L1Q8NH94 360 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 OR10J5Q8NHC4 309 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 IL1F10Q8WWZ1 152 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 EDARADDQ8WWZ3 215 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 ZDHHC16Q969W1 377 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 DIRAS2Q96HU8 199 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 HDHD3Q9BSH5 251 aaPredicted RBP7.38□□□□□ -1.23
CIRBP-218ENST00000588344 DCUN1D5Q9BTE7 237 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 MMP28Q9H239 520 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 DPAGT1Q9H3H5 408 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 OCEL1Q9H607 264 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 EXTL2Q9UBQ6 330 aa7.38□□□□□ -1.23
CIRBP-218ENST00000588344 NIPBLQ6KC79 2804 aaeCLIP7.37□□□□□ -1.23
CIRBP-218ENST00000588344 IGHV3OR16-10A0A075B7F0 116 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 BTBD17A6NE02 478 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 FABP12A6NFH5 140 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 TCF21O43680 179 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 SCTP09683 121 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 PTBP1P26599 531 aaKnown RBP eCLIP7.37□□□□□ -1.23
CIRBP-218ENST00000588344 CEACAM6P40199 344 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 RAB7AP51149 207 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 MADCAM1Q13477 382 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 HLA-DRB5Q30154 266 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 Q6YL49 198 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 LINC00299Q6ZSB3 139 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 SLC25A48Q6ZT89 311 aaKnown RBP7.37□□□□□ -1.23
CIRBP-218ENST00000588344 LDLRAD3Q86YD5 345 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 PDZD9Q8IXQ8 264 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 OR2AK2Q8NG84 335 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 SSMEM1Q8WWF3 244 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 FCAMRQ8WWV6 532 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 TOLLIPQ9H0E2 274 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 MIXL1Q9H2W2 232 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 IFT46Q9NQC8 304 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 SLC23A1Q9UHI7 598 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 ANXA10Q9UJ72 324 aa7.37□□□□□ -1.23
CIRBP-218ENST00000588344 YLPM1P49750 1951 aaKnown RBP7.37□□□□□ -1.23
CIRBP-218ENST00000588344 TRBV6-7A0A0A0MS04 114 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 A0A0U1RQK1 487 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 A0A1W2PRD5 423 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 A0A1W2PRF3 423 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 A0A1W2PRM7 423 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 VGLL3A8MV65 326 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 CLDN34H7C241 214 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 CTDSPLO15194 276 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 TXNL1O43396 289 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 SSX5O60225 188 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 RBBP9O75884 186 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 SLC22A5O76082 557 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 GAPDHP04406 335 aaKnown RBP7.36□□□□□ -1.23
CIRBP-218ENST00000588344 GSTT2P0CG29 244 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 GSTT2BP0CG30 244 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 NAT1P18440 290 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 BRS3P32247 399 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 TNFSF8P32971 234 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 GDNFP39905 211 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 DYNLT3P51808 116 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 ZNF137PP52743 207 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 DLX1P56177 255 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 ARPC4P59998 168 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 SSBP1Q04837 148 aaKnown RBP7.36□□□□□ -1.23
CIRBP-218ENST00000588344 DEFB112Q30KQ8 113 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 SPANXN2Q5MJ10 180 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 RUSC1-AS1Q66K80 236 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 SNX29P2Q8IUI4 249 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 LAX1Q8IWV1 398 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 IZUMO1Q8IYV9 350 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 BCL6BQ8N143 479 aaPredicted RBP7.36□□□□□ -1.23
CIRBP-218ENST00000588344 DTX3Q8N9I9 347 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 BEST4Q8NFU0 473 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 OR52L2PQ8NGH6 319 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 OR4P4Q8NGL7 312 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 OR5R1Q8NH85 324 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 GPX8Q8TED1 209 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 NUDCD2Q8WVJ2 157 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 C22orf15Q8WYQ4 148 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 RPEQ96AT9 228 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 SLC6A7Q99884 636 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 GINS4Q9BRT9 223 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 CABLES2Q9BTV7 478 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 ABCB10Q9NRK6 738 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 NECAP2Q9NVZ3 263 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 PIPOXQ9P0Z9 390 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 ZNF230Q9UIE0 474 aaPredicted RBP7.36□□□□□ -1.23
CIRBP-218ENST00000588344 ZNF107Q9UII5 783 aaPredicted RBP7.36□□□□□ -1.23
CIRBP-218ENST00000588344 ELF5Q9UKW6 265 aaPredicted RBP7.36□□□□□ -1.23
CIRBP-218ENST00000588344 POMT1Q9Y6A1 747 aa7.36□□□□□ -1.23
CIRBP-218ENST00000588344 ANK3Q12955 4377 aaKnown RBP7.35□□□□□ -1.23
CIRBP-218ENST00000588344 MTORP42345 2549 aa7.35□□□□□ -1.23
CIRBP-218ENST00000588344 LY6LH3BQJ8 138 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms