RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-211	ENST00000588200	LINC00527	Q9UJ94	153 aa		10.46	□□□□□ -0.73
PKN1-211	ENST00000588200	TRAPPC2L	Q9UL33	140 aa		10.46	□□□□□ -0.73
PKN1-211	ENST00000588200	MRPS28	Q9Y2Q9	187 aa	Known RBP	10.46	□□□□□ -0.73
PKN1-211	ENST00000588200	LRRC42	Q9Y546	428 aa		10.46	□□□□□ -0.73
PKN1-211	ENST00000588200	IGHV3-72	A0A0B4J1Y9	119 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	NUDT19	A8MXV4	375 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	SLC31A2	O15432	143 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	HBZ	P02008	142 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	NHLRC4	P0CG21	123 aa	Predicted RBP	10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	OR5H8	P0DN80	308 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	CD37	P11049	281 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	PSMB8	P28062	276 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	SOX6	P35712	828 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	DGCR2	P98153	550 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	ST3GAL4	Q11206	333 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	MORN2	Q502X0	79 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	SIGIRR	Q6IA17	410 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	GLIPR1L1	Q6UWM5	242 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	DHRSX	Q8N5I4	330 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	NKAIN3	Q8N8D7	197 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	FBLIM1	Q8WUP2	373 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	CCDC107	Q8WV48	283 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	ORAI1	Q96D31	301 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	DERL3	Q96Q80	235 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	OR14A2	Q96R54	314 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	RASL11B	Q9BPW5	248 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	ETAA1	Q9NY74	926 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	JPT1	Q9UK76	154 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	PEX16	Q9Y5Y5	336 aa		10.45	□□□□□ -0.74
PKN1-211	ENST00000588200	ZNF736	B4DX44	427 aa	Predicted RBP	10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	YPEL1	O60688	119 aa		10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	RPLP1	P05386	114 aa	Known RBP	10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	MGMT	P16455	207 aa		10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	MAPK3	P27361	379 aa	Predicted RBP	10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	PPIF	P30405	207 aa	Known RBP	10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	CAPG	P40121	348 aa		10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	F2RL1	P55085	397 aa		10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	RUNX1	Q01196	453 aa		10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	LSAMP	Q13449	338 aa		10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	C6orf141	Q5SZD1	244 aa		10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	RNLS	Q5VYX0	342 aa		10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	OR5M8	Q8NGP6	311 aa		10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	NEK7	Q8TDX7	302 aa		10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	MUL1	Q969V5	352 aa		10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	YPEL2	Q96QA6	119 aa		10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	TAF9B	Q9HBM6	251 aa		10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	GNG12	Q9UBI6	72 aa		10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	LSM4	Q9Y4Z0	139 aa	Known RBP	10.44	□□□□□ -0.74
PKN1-211	ENST00000588200	IGHV3-43	A0A0B4J1X8	118 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	ANKRD65	E5RJM6	399 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	PDCD6	O75340	191 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	UBB	P0CG47	229 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	IGHV3-43D	P0DP04	118 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	RCC1	P18754	421 aa	Predicted RBP	10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	WNT4	P56705	351 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	CD69	Q07108	199 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	C9orf66	Q5T8R8	295 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	OGFRL1	Q5TC84	451 aa	Predicted RBP	10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	AWAT2	Q6E213	333 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	LAIR2	Q6ISS4	152 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	FAM71F2	Q6NXP2	309 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	ODF3L1	Q8IXM7	274 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	JAGN1	Q8N5M9	183 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	OR4K15	Q8NH41	348 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	OR1L1	Q8NH94	360 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	C4orf3	Q8WVX3	66 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	UBE2E2	Q96LR5	201 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	WWC2-AS2	Q96NR7	200 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	HSPB9	Q9BQS6	159 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	SELENOI	Q9C0D9	397 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	GHITM	Q9H3K2	345 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	PSORS1C1	Q9UIG5	152 aa		10.43	□□□□□ -0.74
PKN1-211	ENST00000588200	CASQ2	O14958	399 aa	Predicted RBP	10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	IGLV1-40	P01703	118 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	HLA-DRB1	P01911	266 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	GNAO1	P09471	354 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	VDAC1	P21796	283 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	INSL3	P51460	131 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	CRIP2	P52943	208 aa	Predicted RBP	10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	KIAA0141	Q14154	515 aa	Predicted RBP	10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	C11orf87	Q6NUJ2	197 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	ZNF833P	Q6ZTB9	187 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	MS4A15	Q8N5U1	240 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	NANOGP1	Q8N7R0	232 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	ZFP41	Q8N8Y5	198 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	NPB	Q8NG41	125 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	UBALD1	Q8TB05	177 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	MRPL30	Q8TCC3	161 aa	Known RBP	10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	KCTD7	Q96MP8	289 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	NABP2	Q9BQ15	211 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	CST11	Q9H112	138 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	OR2S2	Q9NQN1	319 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	FKBP14	Q9NWM8	211 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	KCNIP1	Q9NZI2	227 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	SCOC	Q9UIL1	159 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200	SACS	Q9NZJ4	4579 aa		10.42	□□□□□ -0.74
PKN1-211	ENST00000588200		I3L521	148 aa		10.41	□□□□□ -0.74
PKN1-211	ENST00000588200	ITGB1BP1	O14713	200 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms