RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 DEFB136Q30KP8 78 aa11.26□□□□□ -0.61
VMP1-206ENST00000587945 Q3ZCU0 254 aa11.26□□□□□ -0.61
VMP1-206ENST00000587945 C11orf87Q6NUJ2 197 aa11.26□□□□□ -0.61
VMP1-206ENST00000587945 CDH26Q8IXH8 852 aa11.26□□□□□ -0.61
VMP1-206ENST00000587945 C8orf59Q8N0T1 100 aaPredicted RBP11.26□□□□□ -0.61
VMP1-206ENST00000587945 OR52L2PQ8NGH6 319 aa11.26□□□□□ -0.61
VMP1-206ENST00000587945 RASL11BQ9BPW5 248 aa11.26□□□□□ -0.61
VMP1-206ENST00000587945 DCLRE1BQ9H816 532 aa11.26□□□□□ -0.61
VMP1-206ENST00000587945 C8orf4Q9NR00 106 aa11.26□□□□□ -0.61
VMP1-206ENST00000587945 CCL24O00175 119 aa11.25□□□□□ -0.61
VMP1-206ENST00000587945 SC5DO75845 299 aa11.25□□□□□ -0.61
VMP1-206ENST00000587945 PPP1CCP36873 323 aaKnown RBP11.25□□□□□ -0.61
VMP1-206ENST00000587945 GPR50Q13585 617 aa11.25□□□□□ -0.61
VMP1-206ENST00000587945 MORN2Q502X0 79 aa11.25□□□□□ -0.61
VMP1-206ENST00000587945 NKAPLQ5M9Q1 402 aa11.25□□□□□ -0.61
VMP1-206ENST00000587945 FAM27D1Q5T7N8 215 aa11.25□□□□□ -0.61
VMP1-206ENST00000587945 OR10K2Q6IF99 312 aa11.25□□□□□ -0.61
VMP1-206ENST00000587945 NANOGP1Q8N7R0 232 aa11.25□□□□□ -0.61
VMP1-206ENST00000587945 MRPL30Q8TCC3 161 aaKnown RBP11.25□□□□□ -0.61
VMP1-206ENST00000587945 FBLIM1Q8WUP2 373 aa11.25□□□□□ -0.61
VMP1-206ENST00000587945 DPF1Q92782 380 aa11.25□□□□□ -0.61
VMP1-206ENST00000587945 GPR61Q9BZJ8 451 aa11.25□□□□□ -0.61
VMP1-206ENST00000587945 RAB9BQ9NP90 201 aa11.25□□□□□ -0.61
VMP1-206ENST00000587945 OR2S2Q9NQN1 319 aa11.25□□□□□ -0.61
VMP1-206ENST00000587945 PLCXD1Q9NUJ7 323 aa11.25□□□□□ -0.61
VMP1-206ENST00000587945 FAM90A10PA6NDY2 464 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 FAM90A7PA6NKC0 464 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 FAM90A23PA8MXZ1 464 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 TXNL1O43396 289 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 PDCD6O75340 191 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 CA11O75493 328 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 CD1AP06126 327 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 SLC2A2P11168 524 aaPredicted RBP11.24□□□□□ -0.61
VMP1-206ENST00000587945 MYF6P23409 242 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 SLC6A1P30531 599 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 SOX6P35712 828 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 GP2P55259 537 aaKnown RBP11.24□□□□□ -0.61
VMP1-206ENST00000587945 CFHR3Q02985 330 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 LSAMPQ13449 338 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 TMEM30BQ3MIR4 351 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 CXorf66Q5JRM2 361 aaPredicted RBP11.24□□□□□ -0.61
VMP1-206ENST00000587945 TRAT1Q6PIZ9 186 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 FAM71E2Q8N5Q1 922 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 NKAIN3Q8N8D7 197 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 OR8H1Q8NGG4 311 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 RITA1Q96K30 269 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 UQCC2Q9BRT2 126 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 MCRIP2Q9BUT9 160 aaKnown RBP11.24□□□□□ -0.61
VMP1-206ENST00000587945 MBNL3Q9NUK0 354 aaKnown RBP11.24□□□□□ -0.61
VMP1-206ENST00000587945 FKBP14Q9NWM8 211 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 KCNIP1Q9NZI2 227 aa11.24□□□□□ -0.61
VMP1-206ENST00000587945 H0YHG0 523 aa11.23□□□□□ -0.61
VMP1-206ENST00000587945 LANCL1O43813 399 aa11.23□□□□□ -0.61
VMP1-206ENST00000587945 GLAP06280 429 aa11.23□□□□□ -0.61
VMP1-206ENST00000587945 GABPB1Q06547 395 aaPredicted RBP11.23□□□□□ -0.61
VMP1-206ENST00000587945 FOXE3Q13461 319 aa11.23□□□□□ -0.61
VMP1-206ENST00000587945 ACSM3Q53FZ2 586 aa11.23□□□□□ -0.61
VMP1-206ENST00000587945 VAX1Q5SQQ9 334 aa11.23□□□□□ -0.61
VMP1-206ENST00000587945 OGFRL1Q5TC84 451 aaPredicted RBP11.23□□□□□ -0.61
VMP1-206ENST00000587945 UNQ9370/PRO34162Q6UXP9 181 aa11.23□□□□□ -0.61
VMP1-206ENST00000587945 ODF3L1Q8IXM7 274 aa11.23□□□□□ -0.61
VMP1-206ENST00000587945 SULT4A1Q9BR01 284 aa11.23□□□□□ -0.61
VMP1-206ENST00000587945 ABHD14AQ9BUJ0 271 aa11.23□□□□□ -0.61
VMP1-206ENST00000587945 TMED9Q9BVK6 235 aa11.23□□□□□ -0.61
VMP1-206ENST00000587945 GON7Q9BXV9 100 aa11.23□□□□□ -0.61
VMP1-206ENST00000587945 MRPL20Q9BYC9 149 aaKnown RBP11.23□□□□□ -0.61
VMP1-206ENST00000587945 KCNK15Q9H427 330 aa11.23□□□□□ -0.61
VMP1-206ENST00000587945 ERGIC3Q9Y282 383 aa11.23□□□□□ -0.61
VMP1-206ENST00000587945 RRP9O43818 475 aaKnown RBP11.22□□□□□ -0.61
VMP1-206ENST00000587945 ELANEP08246 267 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 VSIG8P0DPA2 414 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 VDAC1P21796 283 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 CNTFRP26992 372 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 MAPK3P27361 379 aaPredicted RBP11.22□□□□□ -0.61
VMP1-206ENST00000587945 CHATP28329 748 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 OR3A3P47888 321 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 LUMP51884 338 aaPredicted RBP11.22□□□□□ -0.61
VMP1-206ENST00000587945 KIR2DS1Q14954 304 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 MMDQ15546 238 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 C6orf141Q5SZD1 244 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 STEAP3Q658P3 488 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 C6orf201Q7Z4U5 140 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 LRRTM1Q86UE6 522 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 RNF152Q8N8N0 203 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 KCTD7Q96MP8 289 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 NEDD4LQ96PU5 975 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 NABP2Q9BQ15 211 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 FAAP24Q9BTP7 215 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 CST11Q9H112 138 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 GHRLQ9UBU3 117 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 ZNF107Q9UII5 783 aaPredicted RBP11.22□□□□□ -0.61
VMP1-206ENST00000587945 JPT1Q9UK76 154 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 WSB1Q9Y6I7 421 aa11.22□□□□□ -0.61
VMP1-206ENST00000587945 ANKRD65E5RJM6 399 aa11.21□□□□□ -0.61
VMP1-206ENST00000587945 PTGES3LE9PB15 166 aa11.21□□□□□ -0.61
VMP1-206ENST00000587945 CASQ2O14958 399 aaPredicted RBP11.21□□□□□ -0.61
VMP1-206ENST00000587945 IGHG4P01861 327 aa11.21□□□□□ -0.61
VMP1-206ENST00000587945 CDK1P06493 297 aa11.21□□□□□ -0.61
VMP1-206ENST00000587945 HTR2CP28335 458 aa11.21□□□□□ -0.61
VMP1-206ENST00000587945 CDX1P47902 265 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms