RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 DUX4L3P0CJ86 424 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 DUX4L4P0CJ87 422 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 DUX4L5P0CJ88 424 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 DUX4L6P0CJ89 424 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 DUX4L7P0CJ90 424 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 DUX4L9Q6RFH8 374 aaPredicted RBP16.53■□□□□ 0.24
TRIM47-204ENST00000587339 BVESQ8NE79 360 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 TP53RKQ96S44 253 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 PARP12Q9H0J9 701 aaKnown RBP16.53■□□□□ 0.24
TRIM47-204ENST00000587339 DUX4Q9UBX2 424 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 SIGLEC5O15389 551 aa16.52■□□□□ 0.23
TRIM47-204ENST00000587339 TMPRSS2O15393 492 aa16.52■□□□□ 0.23
TRIM47-204ENST00000587339 OR8U9P0C7N5 309 aa16.52■□□□□ 0.23
TRIM47-204ENST00000587339 LIAT1Q6ZQX7 453 aa16.52■□□□□ 0.23
TRIM47-204ENST00000587339 FAM216BQ8N7L0 139 aa16.52■□□□□ 0.23
TRIM47-204ENST00000587339 OR52L2PQ8NGH6 319 aa16.52■□□□□ 0.23
TRIM47-204ENST00000587339 OR8U1Q8NH10 309 aa16.52■□□□□ 0.23
TRIM47-204ENST00000587339 RFESDQ8TAC1 157 aa16.52■□□□□ 0.23
TRIM47-204ENST00000587339 NMES1Q9C002 83 aa16.52■□□□□ 0.23
TRIM47-204ENST00000587339 OR2S2Q9NQN1 319 aa16.52■□□□□ 0.23
TRIM47-204ENST00000587339 OR6C3Q9NZP0 311 aa16.52■□□□□ 0.23
TRIM47-204ENST00000587339 KIAA2026Q5HYC2 2103 aa16.52■□□□□ 0.23
TRIM47-204ENST00000587339 TRAV14DV4A0A0A6YYC5 116 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 NKX6-3A6NJ46 265 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 HMSDA8MTL9 139 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 C15orf65H3BRN8 121 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 CR1LQ2VPA4 569 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 LGI3Q8N145 548 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 LRTM2Q8N967 370 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 MSI2Q96DH6 328 aaKnown RBP16.51■□□□□ 0.23
TRIM47-204ENST00000587339 OR10C1Q96KK4 312 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 GPHA2Q96T91 129 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 NCOR1P1Q9H4R4 102 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 DSCAMO60469 2012 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 ARPC5O15511 151 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 TNFSF12O43508 249 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 PGLYRP1O75594 196 aaPredicted RBP16.51■□□□□ 0.23
TRIM47-204ENST00000587339 SNAPC5O75971 98 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 IFNA21P01568 189 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 GNMTQ14749 295 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 HFEQ30201 348 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 C14orf79Q96F83 325 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 GON7Q9BXV9 100 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 FBXO9Q9UK97 447 aaPredicted RBP16.51■□□□□ 0.23
TRIM47-204ENST00000587339 KCNS2Q9ULS6 477 aa16.51■□□□□ 0.23
TRIM47-204ENST00000587339 ARFGEF3Q5TH69 2177 aa16.5■□□□□ 0.23
TRIM47-204ENST00000587339 PPOXP50336 477 aa16.5■□□□□ 0.23
TRIM47-204ENST00000587339 HTD2P86397 168 aa16.5■□□□□ 0.23
TRIM47-204ENST00000587339 MEX3BQ6ZN04 569 aaKnown RBP16.5■□□□□ 0.23
TRIM47-204ENST00000587339 AKR1E2Q96JD6 320 aa16.5■□□□□ 0.23
TRIM47-204ENST00000587339 C2orf50Q96LR7 162 aa16.5■□□□□ 0.23
TRIM47-204ENST00000587339 TOLLIPQ9H0E2 274 aa16.5■□□□□ 0.23
TRIM47-204ENST00000587339 TMEM222Q9H0R3 208 aa16.5■□□□□ 0.23
TRIM47-204ENST00000587339 UBE2J1Q9Y385 318 aaPredicted RBP16.5■□□□□ 0.23
TRIM47-204ENST00000587339 B8ZZF3 427 aa16.49■□□□□ 0.23
TRIM47-204ENST00000587339 IGLV2-14P01704 120 aa16.49■□□□□ 0.23
TRIM47-204ENST00000587339 SSTR2P30874 369 aa16.49■□□□□ 0.23
TRIM47-204ENST00000587339 PPP1CCP36873 323 aaKnown RBP16.49■□□□□ 0.23
TRIM47-204ENST00000587339 SRPXP78539 464 aa16.49■□□□□ 0.23
TRIM47-204ENST00000587339 C11orf87Q6NUJ2 197 aa16.49■□□□□ 0.23
TRIM47-204ENST00000587339 SLA2Q9H6Q3 261 aa16.49■□□□□ 0.23
TRIM47-204ENST00000587339 CBLN4Q9NTU7 201 aa16.49■□□□□ 0.23
TRIM47-204ENST00000587339 PAIP2BQ9ULR5 123 aaKnown RBP16.49■□□□□ 0.23
TRIM47-204ENST00000587339 SPTBN1Q01082 2364 aaKnown RBP16.49■□□□□ 0.23
TRIM47-204ENST00000587339 RAI1Q7Z5J4 1906 aaPredicted RBP16.49■□□□□ 0.23
TRIM47-204ENST00000587339 TSC22D2O75157 780 aa16.49■□□□□ 0.23
TRIM47-204ENST00000587339 GGNBP1Q5YKI7 109 aa16.49■□□□□ 0.23
TRIM47-204ENST00000587339 FAM53AQ6NSI3 398 aaPredicted RBP16.49■□□□□ 0.23
TRIM47-204ENST00000587339 IGHV3-43A0A0B4J1X8 118 aa16.48■□□□□ 0.23
TRIM47-204ENST00000587339 C19orf84I3L1E1 186 aa16.48■□□□□ 0.23
TRIM47-204ENST00000587339 L7N2F9 121 aa16.48■□□□□ 0.23
TRIM47-204ENST00000587339 MPC2O95563 127 aa16.48■□□□□ 0.23
TRIM47-204ENST00000587339 IGHV3-43DP0DP04 118 aa16.48■□□□□ 0.23
TRIM47-204ENST00000587339 CXCL2P19875 107 aa16.48■□□□□ 0.23
TRIM47-204ENST00000587339 F2RP25116 425 aa16.48■□□□□ 0.23
TRIM47-204ENST00000587339 PSMB6P28072 239 aa16.48■□□□□ 0.23
TRIM47-204ENST00000587339 IAH1Q2TAA2 248 aaPredicted RBP16.48■□□□□ 0.23
TRIM47-204ENST00000587339 LYZL2Q7Z4W2 148 aa16.48■□□□□ 0.23
TRIM47-204ENST00000587339 LHFPL5Q8TAF8 219 aa16.48■□□□□ 0.23
TRIM47-204ENST00000587339 THAP6Q8TBB0 222 aa16.48■□□□□ 0.23
TRIM47-204ENST00000587339 C18orf12Q96KH6 178 aa16.48■□□□□ 0.23
TRIM47-204ENST00000587339 BBC3Q96PG8 261 aaPredicted RBP16.48■□□□□ 0.23
TRIM47-204ENST00000587339 GSKIPQ9P0R6 139 aa16.48■□□□□ 0.23
TRIM47-204ENST00000587339 TRGV10A0A0A0MS01 117 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 H0Y980 276 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 PRB1P04280 392 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 LTC4SQ16873 150 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 TMEM268Q5VZI3 342 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 ZNF546Q86UE3 836 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 RAB9BQ9NP90 201 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 CALYQ9NYX4 217 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 SLC25A10Q9UBX3 287 aaPredicted RBP16.47■□□□□ 0.23
TRIM47-204ENST00000587339 ABCA4P78363 2273 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 RGS13O14921 159 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 SLC25A4P12235 298 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 NDUFB7P17568 137 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 C4BPBP20851 252 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 ZNF695Q8IW36 515 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 DRAM1Q8N682 238 aa16.47■□□□□ 0.23
TRIM47-204ENST00000587339 ZNF645Q8N7E2 425 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms