RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 MTNR1BP49286 362 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 RAB7AP51149 207 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 SLC35B1P78383 322 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 EBI3Q14213 229 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 PNLIPRP3Q17RR3 467 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 TIMM50Q3ZCQ8 353 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 ELP2Q6IA86 826 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 CEACAM19Q7Z692 300 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 C5orf24Q7Z6I8 188 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 OR8H3Q8N146 312 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 Q8N6K4 173 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 OR13C5Q8NGS8 318 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 OR10X1Q8NGY0 326 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 CCDC107Q8WV48 283 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 HSPB9Q9BQS6 159 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 BARHL1Q9BZE3 327 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 TMEM138Q9NPI0 162 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 TAS2R4Q9NYW5 299 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 TENM2Q9NT68 2774 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 HTR3BO95264 441 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 NHLRC4P0CG21 123 aaPredicted RBP9.09□□□□□ -0.95
LIG3-207ENST00000586119 BDKRB2P30411 391 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 FGF9P31371 208 aaPredicted RBP9.09□□□□□ -0.95
LIG3-207ENST00000586119 RANBP1P43487 201 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 F2RL1P55085 397 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 FABP5Q01469 135 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 ZNF816Q0VGE8 651 aaPredicted RBP9.09□□□□□ -0.95
LIG3-207ENST00000586119 KIR2DS1Q14954 304 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 HSD17B12Q53GQ0 312 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 TEX38Q6PEX7 206 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 TMEM91Q6ZNR0 172 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 FOXRED2Q8IWF2 684 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 NKAIN3Q8N8D7 197 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 SUMF2Q8NBJ7 301 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 TNFAIP8L1Q8WVP5 186 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 TMEM203Q969S6 136 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 ORAI1Q96D31 301 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 ABCG5Q9H222 651 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 NCOR1P1Q9H4R4 102 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 RHOFQ9HBH0 211 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 PCDHB16Q9NRJ7 776 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 STUB1Q9UNE7 303 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 SSR3Q9UNL2 185 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 ING4Q9UNL4 249 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 DNAH7Q8WXX0 4024 aa9.09□□□□□ -0.95
LIG3-207ENST00000586119 A0A1W2PP11 408 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 C15orf65H3BRN8 121 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 RAMP3O60896 148 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 GAPDHP04406 335 aaKnown RBP9.08□□□□□ -0.96
LIG3-207ENST00000586119 CD36P16671 472 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 SRMP19623 302 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 CDX1P47902 265 aaPredicted RBP9.08□□□□□ -0.96
LIG3-207ENST00000586119 ALDH3B2P48448 385 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 PSMD7P51665 324 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 TGIF2LXQ8IUE1 241 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 COMMD1Q8N668 190 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 TMEM104Q8NE00 496 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 PXT1Q8NFP0 134 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 OR13F1Q8NGS4 319 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 ARL11Q969Q4 196 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 ST6GALNAC6Q969X2 333 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 YIPF6Q96EC8 236 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 GPER1Q99527 375 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 DPCDQ9BVM2 203 aaPredicted RBP9.08□□□□□ -0.96
LIG3-207ENST00000586119 FAM192AQ9GZU8 254 aa9.08□□□□□ -0.96
LIG3-207ENST00000586119 TRAV1-2A0A0B4J238 106 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 A0A1W2PPK0 400 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 SEC14L6B5MCN3 397 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 AP4M1O00189 453 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 PDCD5O14737 125 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 GEMIN2O14893 280 aaKnown RBP9.07□□□□□ -0.96
LIG3-207ENST00000586119 TFAP2AP05549 437 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 SLC6A1P30531 599 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 RPL5P46777 297 aaKnown RBP9.07□□□□□ -0.96
LIG3-207ENST00000586119 ZNF134P52741 427 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 CFHR3Q02985 330 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 KIAA0141Q14154 515 aaPredicted RBP9.07□□□□□ -0.96
LIG3-207ENST00000586119 IL13RA2Q14627 380 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 RSU1Q15404 277 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 ZNF260Q3ZCT1 412 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 CXorf66Q5JRM2 361 aaPredicted RBP9.07□□□□□ -0.96
LIG3-207ENST00000586119 C9orf66Q5T8R8 295 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 DDI2Q5TDH0 399 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 ASPHD1Q5U4P2 390 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 ASCL4Q6XD76 172 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 Q8NFD4 153 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 OR5M8Q8NGP6 311 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 OR2T10Q8NGZ9 312 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 RITA1Q96K30 269 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 S1PR3Q99500 378 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 KLK15Q9H2R5 256 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 LIN7CQ9NUP9 197 aaKnown RBP9.07□□□□□ -0.96
LIG3-207ENST00000586119 ST3GAL6Q9Y274 331 aa9.07□□□□□ -0.96
LIG3-207ENST00000586119 TRAV8-7A0A075B6U6 113 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 SDCBPO00560 298 aaPredicted RBP9.06□□□□□ -0.96
LIG3-207ENST00000586119 OR7C1O76099 320 aaPredicted RBP9.06□□□□□ -0.96
LIG3-207ENST00000586119 CD37P11049 281 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 GADD45AP24522 165 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 MYL9P24844 172 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 ZNF93P35789 620 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms