RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 IGFBP3P17936 291 aaPredicted RBP11.76□□□□□ -0.53
VAPA-209ENST00000585042 SOX6P35712 828 aa11.76□□□□□ -0.53
VAPA-209ENST00000585042 CFHR3Q02985 330 aa11.76□□□□□ -0.53
VAPA-209ENST00000585042 YIF1BQ5BJH7 314 aa11.76□□□□□ -0.53
VAPA-209ENST00000585042 ATAD3CQ5T2N8 411 aa11.76□□□□□ -0.53
VAPA-209ENST00000585042 TRAT1Q6PIZ9 186 aa11.76□□□□□ -0.53
VAPA-209ENST00000585042 LCNL1Q6ZST4 164 aa11.76□□□□□ -0.53
VAPA-209ENST00000585042 CDH26Q8IXH8 852 aa11.76□□□□□ -0.53
VAPA-209ENST00000585042 GAPTQ8N292 157 aa11.76□□□□□ -0.53
VAPA-209ENST00000585042 FAM71E2Q8N5Q1 922 aa11.76□□□□□ -0.53
VAPA-209ENST00000585042 NANOGP1Q8N7R0 232 aa11.76□□□□□ -0.53
VAPA-209ENST00000585042 C4orf3Q8WVX3 66 aa11.76□□□□□ -0.53
VAPA-209ENST00000585042 THRSPQ92748 146 aa11.76□□□□□ -0.53
VAPA-209ENST00000585042 GHSRQ92847 366 aa11.76□□□□□ -0.53
VAPA-209ENST00000585042 ZNF581Q9P0T4 197 aa11.76□□□□□ -0.53
VAPA-209ENST00000585042 CKLFQ9UBR5 152 aa11.76□□□□□ -0.53
VAPA-209ENST00000585042 KMT2CQ8NEZ4 4911 aaKnown RBP11.76□□□□□ -0.53
VAPA-209ENST00000585042 AIPO00170 330 aa11.75□□□□□ -0.53
VAPA-209ENST00000585042 SERPINA2P20848 420 aa11.75□□□□□ -0.53
VAPA-209ENST00000585042 VDAC1P21796 283 aa11.75□□□□□ -0.53
VAPA-209ENST00000585042 PSMB8P28062 276 aa11.75□□□□□ -0.53
VAPA-209ENST00000585042 INSL3P51460 131 aa11.75□□□□□ -0.53
VAPA-209ENST00000585042 C6orf183Q5T699 404 aa11.75□□□□□ -0.53
VAPA-209ENST00000585042 DMKNQ6E0U4 476 aaPredicted RBP11.75□□□□□ -0.53
VAPA-209ENST00000585042 XAF1Q6GPH4 301 aa11.75□□□□□ -0.53
VAPA-209ENST00000585042 ZNF554Q86TJ5 538 aa11.75□□□□□ -0.53
VAPA-209ENST00000585042 ZNF439Q8NDP4 499 aa11.75□□□□□ -0.53
VAPA-209ENST00000585042 NEK7Q8TDX7 302 aa11.75□□□□□ -0.53
VAPA-209ENST00000585042 CCDC107Q8WV48 283 aa11.75□□□□□ -0.53
VAPA-209ENST00000585042 CNBD2Q96M20 576 aa11.75□□□□□ -0.53
VAPA-209ENST00000585042 DUX3Q96PT4 197 aa11.75□□□□□ -0.53
VAPA-209ENST00000585042 RCC2Q9P258 522 aaKnown RBP11.75□□□□□ -0.53
VAPA-209ENST00000585042 TRAPPC2LQ9UL33 140 aa11.75□□□□□ -0.53
VAPA-209ENST00000585042 U3KQK5 164 aa11.75□□□□□ -0.53
VAPA-209ENST00000585042 FAM90A10PA6NDY2 464 aa11.74□□□□□ -0.53
VAPA-209ENST00000585042 FAM90A7PA6NKC0 464 aa11.74□□□□□ -0.53
VAPA-209ENST00000585042 FAM90A23PA8MXZ1 464 aa11.74□□□□□ -0.53
VAPA-209ENST00000585042 RGS10O43665 173 aa11.74□□□□□ -0.53
VAPA-209ENST00000585042 LANCL1O43813 399 aa11.74□□□□□ -0.53
VAPA-209ENST00000585042 CD1AP06126 327 aa11.74□□□□□ -0.53
VAPA-209ENST00000585042 CELP19835 753 aa11.74□□□□□ -0.53
VAPA-209ENST00000585042 RAB25P57735 213 aa11.74□□□□□ -0.53
VAPA-209ENST00000585042 FHL3Q13643 280 aa11.74□□□□□ -0.53
VAPA-209ENST00000585042 Q499Y3 187 aa11.74□□□□□ -0.53
VAPA-209ENST00000585042 SLC22A6Q4U2R8 563 aa11.74□□□□□ -0.53
VAPA-209ENST00000585042 CT45A1Q5HYN5 189 aa11.74□□□□□ -0.53
VAPA-209ENST00000585042 RBM48Q5RL73 367 aaKnown RBP11.74□□□□□ -0.53
VAPA-209ENST00000585042 SYT6Q5T7P8 510 aaPredicted RBP11.74□□□□□ -0.53
VAPA-209ENST00000585042 ZNF485Q8NCK3 441 aa11.74□□□□□ -0.53
VAPA-209ENST00000585042 CT45A3Q8NHU0 189 aa11.74□□□□□ -0.53
VAPA-209ENST00000585042 ZNF184Q99676 751 aaPredicted RBP11.74□□□□□ -0.53
VAPA-209ENST00000585042 SCOCQ9UIL1 159 aa11.74□□□□□ -0.53
VAPA-209ENST00000585042 RRP15Q9Y3B9 282 aaKnown RBP11.74□□□□□ -0.53
VAPA-209ENST00000585042 TRBV5-5A0A0J9YX44 114 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 SEC14L6B5MCN3 397 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 C12orf77C9JDV5 145 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 LALBAP00709 142 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 MAPK3P27361 379 aaPredicted RBP11.73□□□□□ -0.53
VAPA-209ENST00000585042 ZNF134P52741 427 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 F2RL1P55085 397 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 RUNX1Q01196 453 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 SPHARQ15513 63 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 MS4A15Q8N5U1 240 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 ZFP41Q8N8Y5 198 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 MYOZ3Q8TDC0 251 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 UBE2E2Q96LR5 201 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 CCDC90BQ9GZT6 254 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 DUSP21Q9H596 190 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 ETAA1Q9NY74 926 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 GNG12Q9UBI6 72 aa11.73□□□□□ -0.53
VAPA-209ENST00000585042 IGHV3-43A0A0B4J1X8 118 aa11.72□□□□□ -0.53
VAPA-209ENST00000585042 ZNF736B4DX44 427 aaPredicted RBP11.72□□□□□ -0.53
VAPA-209ENST00000585042 SC5DO75845 299 aa11.72□□□□□ -0.53
VAPA-209ENST00000585042 HBZP02008 142 aa11.72□□□□□ -0.53
VAPA-209ENST00000585042 IGHV3-43DP0DP04 118 aa11.72□□□□□ -0.53
VAPA-209ENST00000585042 FSTP19883 344 aa11.72□□□□□ -0.53
VAPA-209ENST00000585042 LUMP51884 338 aaPredicted RBP11.72□□□□□ -0.53
VAPA-209ENST00000585042 MED22Q15528 200 aa11.72□□□□□ -0.53
VAPA-209ENST00000585042 DEFB136Q30KP8 78 aa11.72□□□□□ -0.53
VAPA-209ENST00000585042 LY6G6FQ5SQ64 297 aa11.72□□□□□ -0.53
VAPA-209ENST00000585042 TMEM65Q6PI78 240 aa11.72□□□□□ -0.53
VAPA-209ENST00000585042 KCTD7Q96MP8 289 aa11.72□□□□□ -0.53
VAPA-209ENST00000585042 HSPB9Q9BQS6 159 aa11.72□□□□□ -0.53
VAPA-209ENST00000585042 LRRC42Q9Y546 428 aa11.72□□□□□ -0.53
VAPA-209ENST00000585042 PNMA8CA0A1B0GUJ8 204 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 C3orf84H3BNL1 204 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 SLC31A2O15432 143 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 OR8U8P0C7N1 319 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 FUT3P21217 361 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 CRHBPP24387 322 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 CHATP28329 748 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 PPIFP30405 207 aaKnown RBP11.71□□□□□ -0.53
VAPA-209ENST00000585042 ECI1P42126 302 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 HTD2P86397 168 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 LSAMPQ13449 338 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 MORN2Q502X0 79 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 NKAPLQ5M9Q1 402 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 RAB12Q6IQ22 244 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 PRSS48Q7RTY5 328 aa11.71□□□□□ -0.53
VAPA-209ENST00000585042 OR11H1Q8NG94 326 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms