RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, human

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF43-208	ENST00000584437	OR2A4	O95047	310 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	ZFP36L2	P47974	494 aa	Known RBP	11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	NMU	P48645	174 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	CEBPD	P49716	269 aa	Predicted RBP	11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	ZNF137P	P52743	207 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	TCTA	P57738	103 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	HIST1H2BA	Q96A08	127 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	OR2A7	Q96R45	310 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	NPIPB9	F8W1W9	429 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	RAB29	O14966	203 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	CD82	P27701	267 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	MPL	P40238	635 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	PCOLCE2	Q9UKZ9	415 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	TAF1	P21675	1872 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	ISG15	P05161	165 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	ERAS	Q7Z444	233 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	ZPLD1	Q8TCW7	415 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	RNF7	Q9UBF6	113 aa		11.37	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM90A10P	A6NDY2	464 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM90A18P	A6NE21	464 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM90A16P	A6NEW6	464 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM90A20P	A6NIJ5	464 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM90A8P	A6NJQ4	464 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM90A7P	A6NKC0	464 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM90A22P	A8MWA6	464 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM90A12P	A8MX19	464 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM90A5P	A8MXJ8	464 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM90A23P	A8MXZ1	464 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437		K7EQS6	105 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM90A15P	P0C7V4	464 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM90A13P	P0C7W8	464 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM90A14P	P0C7W9	464 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM90A24P	P0C7X0	464 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	AES	Q08117	197 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	IBA57	Q5T440	356 aa	Known RBP	11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	AQP3	Q92482	292 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	ZNF665	Q9H7R5	613 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	TMEM140	Q9NV12	185 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	BRWD1	Q9NSI6	2320 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	TRBV5-7	A0A0A0MS05	114 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437		M0R3E3	92 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	HOXD4	P09016	255 aa	Predicted RBP	11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	BTF3	P20290	206 aa	Known RBP	11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	SF3B6	Q9Y3B4	125 aa	Known RBP	11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	DOCK2	Q92608	1830 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM90A26	D6RGX4	464 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	NGFR	P08138	427 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	KLK2	P20151	261 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	LEMD1	Q68G75	181 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	SLC25A34	Q6PIV7	304 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	OR2Y1	Q8NGV0	311 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	RAB1C	Q92928	201 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	RHOV	Q96L33	236 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	OR4C46	A6NHA9	309 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	LINC01565	O15544	149 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	C1QL1	O75973	258 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	ASCL5	Q7RTU5	278 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	TAF15	Q92804	592 aa	Known RBP eCLIP	11.36	□□□□□ -0.59	4e-7	■■■■□ 23.8
RNF43-208	ENST00000584437	TINAG	Q9UJW2	476 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	ITGB4	P16144	1822 aa		11.36	□□□□□ -0.59
RNF43-208	ENST00000584437	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437		H0YL77	283 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	HRK	O00198	91 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	PPIH	O43447	177 aa	Known RBP	11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	H2BFS	P57053	126 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	MTURN	Q8N3F0	131 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	OR5R1	Q8NH85	324 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	YBX2	Q9Y2T7	364 aa	Known RBP	11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	OR51B2	Q9Y5P1	312 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	DANCR	P0C864	163 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	SELENOT	P62341	195 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	TUSC5	Q8IXB3	177 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	MRPL18	Q9H0U6	180 aa	Known RBP	11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	HYAL1	Q12794	435 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	GAB4	Q2WGN9	574 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	FAM27B	Q5VT28	67 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	UNQ9370/PRO34162	Q6UXP9	181 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	PQLC2	Q6ZP29	291 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	TDH	Q8IZJ6	230 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	RFLNB	Q8N5W9	214 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	TMEM45B	Q96B21	275 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	MBD1	Q9UIS9	605 aa	Predicted RBP	11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	HIGD1A	Q9Y241	93 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	TRBV9	A0A0B4J1U6	114 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	TMPRSS2	O15393	492 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	HYPM	O75409	117 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	WNT5A	P41221	380 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	KIR2DL1	P43626	348 aa	Predicted RBP	11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	KIR2DL2	P43627	348 aa	Predicted RBP	11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	GLIPR1	P48060	266 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	RND3	P61587	244 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	RPS11	P62280	158 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	RELB	Q01201	579 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	WDR74	Q6RFH5	385 aa	Predicted RBP	11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	TMEM208	Q9BTX3	173 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	BTAF1	O14981	1849 aa		11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	ZFC3H1	O60293	1989 aa	Known RBP	11.35	□□□□□ -0.59
RNF43-208	ENST00000584437	FBLL1	A6NHQ2	334 aa	Known RBP	11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms