RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	IRF3	Q14653	427 aa		10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	TMEM30B	Q3MIR4	351 aa		10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	KPRP	Q5T749	579 aa	Predicted RBP	10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	SLC25A48	Q6ZT89	311 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	SLC35E3	Q7Z769	313 aa		10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	TGIF2LX	Q8IUE1	241 aa		10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	GAPT	Q8N292	157 aa		10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	ZNF439	Q8NDP4	499 aa		10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	OR52L2P	Q8NGH6	319 aa		10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	MRPL30	Q8TCC3	161 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	ST6GALNAC6	Q969X2	333 aa		10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	FAAP24	Q9BTP7	215 aa		10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	TMEM59	Q9BXS4	323 aa		10.79	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	ERICH4	A6NGS2	130 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	UCHL1	P09936	223 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	IGLL1	P15814	213 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	MYF6	P23409	242 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	HTR2C	P28335	458 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	RPS27A	P62979	156 aa	Known RBP	10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	EBI3	Q14213	229 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	GNMT	Q14749	295 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	P2RY14	Q15391	338 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186		Q3ZCU0	254 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	C1orf100	Q5SVJ3	147 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	FOXRED2	Q8IWF2	684 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	IZUMO1	Q8IYV9	350 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	KCNG3	Q8TAE7	436 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	CHPT1	Q8WUD6	406 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	SULT4A1	Q9BR01	284 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	DUSP21	Q9H596	190 aa		10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	CHMP1A	Q9HD42	196 aa	Predicted RBP	10.78	□□□□□ -0.68
CDK5RAP3-233	ENST00000584186	LINC01548	A6NM66	108 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	SLC22A1	O15245	554 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	TXNL1	O43396	289 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	MOS	P00540	346 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	CHAT	P28329	748 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	CD1B	P29016	333 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	PPP1CC	P36873	323 aa	Known RBP	10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	RPS25	P62851	125 aa	Known RBP	10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	SLC35B1	P78383	322 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	UNC119	Q13432	240 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	MORN2	Q502X0	79 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	IZUMO2	Q6UXV1	221 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	C6orf201	Q7Z4U5	140 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186		Q8N6K4	173 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	SETD6	Q8TBK2	473 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	PHF21A	Q96BD5	680 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	RASL11B	Q9BPW5	248 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	NICN1	Q9BSH3	213 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	ANKRD60	Q9BZ19	345 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	VCX3B	Q9H321	246 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	PLGRKT	Q9HBL7	147 aa		10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	MBNL3	Q9NUK0	354 aa	Known RBP	10.77	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	NUDT19	A8MXV4	375 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	IGHG2	P01859	326 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	CRHBP	P24387	322 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	BLVRB	P30043	206 aa	Predicted RBP	10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	MAP2K4	P45985	399 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	GPR12	P47775	334 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	TPBG	Q13641	420 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	STEAP3	Q658P3	488 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	TMEM91	Q6ZNR0	172 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	STPG2	Q8N412	459 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186		Q8N9W7	124 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	WFDC9	Q8NEX5	89 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	OR6M1	Q8NGM8	313 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	IL1F10	Q8WWZ1	152 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	GALM	Q96C23	342 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	CNBD2	Q96M20	576 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	ABHD14A	Q9BUJ0	271 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	LIN7C	Q9NUP9	197 aa	Known RBP	10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	NECAP2	Q9NVZ3	263 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	PLEKHJ1	Q9NW61	149 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	ABRACL	Q9P1F3	81 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	JPT1	Q9UK76	154 aa		10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	AK6	Q9Y3D8	172 aa	Known RBP	10.76	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	AP4M1	O00189	453 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	BPNT1	O95861	308 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	ARSB	P15848	533 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	CALR	P27797	417 aa	Known RBP	10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	ZNF137P	P52743	207 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	F2RL1	P55085	397 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	RPL23A	P62750	156 aa	Known RBP	10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	MLLT11	Q13015	90 aa	Predicted RBP	10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	TRAM1	Q15629	374 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	FOXB2	Q5VYV0	432 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	C18orf65	Q6ZTR6	163 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	REC114	Q7Z4M0	266 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	ZNF554	Q86TJ5	538 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	MRAP	Q8TCY5	172 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	S1PR3	Q99500	378 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	TM2D1	Q9BX74	207 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	ABCG5	Q9H222	651 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	PLSCR3	Q9NRY6	295 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	NOTCH3	Q9UM47	2321 aa		10.75	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186		A0A0A6YYD4	124 aa		10.74	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	TMEM14DP	A8MWL7	114 aa		10.74	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	LANCL1	O43813	399 aa		10.74	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	ARL6IP5	O75915	188 aa		10.74	□□□□□ -0.69
CDK5RAP3-233	ENST00000584186	RGS11	O94810	467 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms