RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 F2RL2O00254 374 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 GLAP06280 429 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 IGHV1-8P0DP01 117 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 CDK2P24941 298 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 BLCAPP62952 87 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 LTC4SQ16873 150 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 C17orf58Q2M2W7 97 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 PLAC9Q5JTB6 97 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 BAIAP2L2Q6UXY1 529 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 RFESDQ8TAC1 157 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 UBALD1Q8TB05 177 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 SLC25A46Q96AG3 418 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 PECRQ9BY49 303 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 DCSTAMPQ9H295 470 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 TAS2R3Q9NYW6 316 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 COL7A1Q02388 2944 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 KBTBD11-OT1A0A1B0GTJ5 212 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 FAM172BPA6NC97 362 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 ZNF729A6NN14 1252 aaPredicted RBP12.53□□□□□ -0.4
SKA2-209ENST00000583976 FOXI3A8MTJ6 420 aaPredicted RBP12.53□□□□□ -0.4
SKA2-209ENST00000583976 SSTR5P35346 364 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 GDNFP39905 211 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 VDAC2P45880 294 aaPredicted RBP12.53□□□□□ -0.4
SKA2-209ENST00000583976 LOXL3P58215 753 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 PAX5Q02548 391 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 ARSJQ5FYB0 599 aaPredicted RBP12.53□□□□□ -0.4
SKA2-209ENST00000583976 FOXB2Q5VYV0 432 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 CROCCP3Q8IVE0 287 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 OR4F17Q8NGA8 305 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 OR11H6Q8NGC7 330 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 OR13D1Q8NGV5 346 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 OR10R2Q8NGX6 335 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 PTX4Q96A99 478 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 RAB3CQ96E17 227 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 OR4F4Q96R69 305 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 HDHD3Q9BSH5 251 aaPredicted RBP12.53□□□□□ -0.4
SKA2-209ENST00000583976 NCOR1P1Q9H4R4 102 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 CHMP1AQ9HD42 196 aaPredicted RBP12.53□□□□□ -0.4
SKA2-209ENST00000583976 CALYQ9NYX4 217 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 AK3Q9UIJ7 227 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 HILPDAQ9Y5L2 63 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 KIAA2026Q5HYC2 2103 aa12.53□□□□□ -0.4
SKA2-209ENST00000583976 RAB27BO00194 218 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 RBP4P02753 201 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 CGB3P0DN86 165 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 CGB7P0DN87 165 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 IGLL1P15814 213 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 GNB3P16520 340 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 RCC1P18754 421 aaPredicted RBP12.52□□□□□ -0.41
SKA2-209ENST00000583976 NFYBP25208 207 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 RORCP51449 518 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 SPCS2Q15005 226 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 HEPN1Q6WQI6 88 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 C5orf24Q7Z6I8 188 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 PRR18Q8N4B5 295 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 SETD6Q8TBK2 473 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 MRPL30Q8TCC3 161 aaKnown RBP12.52□□□□□ -0.41
SKA2-209ENST00000583976 RAB2BQ8WUD1 216 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 ARL11Q969Q4 196 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 PRSS22Q9GZN4 317 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 RHBDL2Q9NX52 303 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 ABRACLQ9P1F3 81 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 HSF4Q9ULV5 492 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 SESN1Q9Y6P5 492 aa12.52□□□□□ -0.41
SKA2-209ENST00000583976 IGHV2-26A0A0B4J1V2 119 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 CCDC160A6NGH7 325 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 NOL3O60936 208 aaKnown RBP12.51□□□□□ -0.41
SKA2-209ENST00000583976 PEX14O75381 377 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 CA11O75493 328 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 IGHV3-7P01780 117 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 GZMHP20718 246 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 CD24P25063 80 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 TMBIM6P55061 237 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 TCTEX1D4Q5JR98 221 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 GAPTQ8N292 157 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 SLC25A38Q96DW6 304 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 MALSU1Q96EH3 234 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 CMSS1Q9BQ75 279 aaKnown RBP12.51□□□□□ -0.41
SKA2-209ENST00000583976 TMEM133Q9H2Q1 129 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 IDI2-AS1Q9NZ38 188 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 SPATA2Q9UM82 520 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 ETV7Q9Y603 341 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 CEPT1Q9Y6K0 416 aa12.51□□□□□ -0.41
SKA2-209ENST00000583976 SH2D7A6NKC9 451 aaPredicted RBP12.5□□□□□ -0.41
SKA2-209ENST00000583976 SCAND1P57086 179 aa12.5□□□□□ -0.41
SKA2-209ENST00000583976 UTF1Q5T230 341 aa12.5□□□□□ -0.41
SKA2-209ENST00000583976 C11orf87Q6NUJ2 197 aa12.5□□□□□ -0.41
SKA2-209ENST00000583976 C10orf99Q6UWK7 81 aa12.5□□□□□ -0.41
SKA2-209ENST00000583976 DTX3Q8N9I9 347 aa12.5□□□□□ -0.41
SKA2-209ENST00000583976 LEAP2Q969E1 77 aa12.5□□□□□ -0.41
SKA2-209ENST00000583976 ISOC1Q96CN7 298 aa12.5□□□□□ -0.41
SKA2-209ENST00000583976 KIRREL1Q96J84 757 aa12.5□□□□□ -0.41
SKA2-209ENST00000583976 OCSTAMPQ9BR26 566 aa12.5□□□□□ -0.41
SKA2-209ENST00000583976 COMMD3Q9UBI1 195 aa12.5□□□□□ -0.41
SKA2-209ENST00000583976 PITPNC1Q9UKF7 332 aa12.5□□□□□ -0.41
SKA2-209ENST00000583976 ELF5Q9UKW6 265 aaPredicted RBP12.5□□□□□ -0.41
SKA2-209ENST00000583976 KCNK7Q9Y2U2 307 aa12.5□□□□□ -0.41
SKA2-209ENST00000583976 IGHV3-43A0A0B4J1X8 118 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 C12orf77C9JDV5 145 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 NPIPB11E5RHQ5 1161 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms