RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 ST6GALNAC5Q9BVH7 336 aa7.61□□□□□ -1.19
UBBP4-201ENST00000583708 MS4A7Q9GZW8 240 aaPredicted RBP7.61□□□□□ -1.19
UBBP4-201ENST00000583708 ZMAT3Q9HA38 289 aaKnown RBP7.61□□□□□ -1.19
UBBP4-201ENST00000583708 IFT46Q9NQC8 304 aa7.61□□□□□ -1.19
UBBP4-201ENST00000583708 ING3Q9NXR8 418 aa7.61□□□□□ -1.19
UBBP4-201ENST00000583708 DPM3Q9P2X0 92 aa7.61□□□□□ -1.19
UBBP4-201ENST00000583708 GNG12Q9UBI6 72 aa7.61□□□□□ -1.19
UBBP4-201ENST00000583708 ANXA10Q9UJ72 324 aa7.61□□□□□ -1.19
UBBP4-201ENST00000583708 GAB2Q9UQC2 676 aa7.61□□□□□ -1.19
UBBP4-201ENST00000583708 TRBV6-7A0A0A0MS04 114 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 ODF3BA8MYP8 253 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 LEUTXA8MZ59 168 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 RNASEK-C17orf49H0YIS7 233 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 J3QR06 171 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 NPFFO15130 113 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 HSPA12AO43301 675 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 TXNL1O43396 289 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 SSX5O60225 188 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 AVPP01185 164 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 IFNA2P01563 188 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 IGLV1-47P01700 117 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 FBP1P09467 338 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 HOXB4P17483 251 aaPredicted RBP7.6□□□□□ -1.19
UBBP4-201ENST00000583708 HTR1DP28221 377 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 SSTR5P35346 364 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 ZNF137PP52743 207 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 MSMO1Q15800 293 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 CNPY1Q3B7I2 92 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 MORN2Q502X0 79 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 KLF17Q5JT82 389 aaPredicted RBP7.6□□□□□ -1.19
UBBP4-201ENST00000583708 FAM71F2Q6NXP2 309 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 TMEM86BQ8N661 226 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 GDPD1Q8N9F7 314 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 DTX3Q8N9I9 347 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 BEST4Q8NFU0 473 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 OR5AP2Q8NGF4 316 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 OR10J5Q8NHC4 309 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 RFESDQ8TAC1 157 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 SMR3AQ99954 134 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 SUCNR1Q9BXA5 334 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 MEGF9Q9H1U4 602 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 GSX1Q9H4S2 264 aaPredicted RBP7.6□□□□□ -1.19
UBBP4-201ENST00000583708 SIRT7Q9NRC8 400 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 NECAP2Q9NVZ3 263 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 PIPOXQ9P0Z9 390 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 MTFP1Q9UDX5 166 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 FAM96BQ9Y3D0 163 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 SONP18583 2426 aaKnown RBP7.6□□□□□ -1.19
UBBP4-201ENST00000583708 KIAA2026Q5HYC2 2103 aa7.6□□□□□ -1.19
UBBP4-201ENST00000583708 ARHGAP32A7KAX9 2087 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 DSCAML1Q8TD84 2053 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 NFYBP25208 207 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 CEACAM6P40199 344 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 OR3A3P47888 321 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 DYNLT3P51808 116 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 AP3S2P59780 193 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 ARPC4P59998 168 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 TAGLNQ01995 201 aaKnown RBP7.59□□□□□ -1.19
UBBP4-201ENST00000583708 MADCAM1Q13477 382 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 IL18Q14116 193 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 HLA-DRB5Q30154 266 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 PRAMEF5Q5TYX0 476 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 OLFML2AQ68BL7 652 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 HCP5Q6MZN7 132 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 DHRS11Q6UWP2 260 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 FAM131AQ6UXB0 335 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 RBMS3Q6XE24 437 aaKnown RBP7.59□□□□□ -1.19
UBBP4-201ENST00000583708 SLC25A48Q6ZT89 311 aaKnown RBP7.59□□□□□ -1.19
UBBP4-201ENST00000583708 TMEM17Q86X19 198 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 OR8H3Q8N146 312 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 PNKDQ8N490 385 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.59□□□□□ -1.19
UBBP4-201ENST00000583708 OR2AK2Q8NG84 335 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 OR1L1Q8NH94 360 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 ZNF418Q8TF45 676 aaPredicted RBP7.59□□□□□ -1.19
UBBP4-201ENST00000583708 SMIM4Q8WVI0 70 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 NUDCD2Q8WVJ2 157 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 GIMAP1Q8WWP7 306 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 ABHD1Q96SE0 405 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 HDHD3Q9BSH5 251 aaPredicted RBP7.59□□□□□ -1.19
UBBP4-201ENST00000583708 MMP28Q9H239 520 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 PSG11Q9UQ72 335 aa7.59□□□□□ -1.19
UBBP4-201ENST00000583708 RBMX2Q9Y388 322 aaKnown RBP7.59□□□□□ -1.19
UBBP4-201ENST00000583708 NIPBLQ6KC79 2804 aaeCLIP7.59□□□□□ -1.19
UBBP4-201ENST00000583708 TRAV40A0A0B4J280 105 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 VGLL3A8MV65 326 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 INAFM1C9JVW0 142 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 BUB1B-PAK6H3BSN5 160 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 RAB29O14966 203 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 GAPDHP04406 335 aaKnown RBP7.58□□□□□ -1.2
UBBP4-201ENST00000583708 ARG1P05089 322 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 CSF1P09603 554 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 SCTP09683 121 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 GSTT2P0CG29 244 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 IGHV4-38-2P0DP08 117 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 OMGP23515 440 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 BRS3P32247 399 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 TAS2R19P59542 299 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 MEF2DQ14814 521 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 CDK10Q15131 360 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms