RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 C1DQ13901 141 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 PDK2Q15119 407 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 HES3Q5TGS1 186 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 SDHAF4Q5VUM1 108 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 SCGB1D4Q6XE38 83 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 BOD1L2Q8IYS8 172 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 OR10P1Q8NGE3 313 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 MFSD8Q8NHS3 518 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 CD200R1Q8TD46 325 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 DCUN1D5Q9BTE7 237 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 BBS2Q9BXC9 721 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 SLC19A3Q9BZV2 496 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 NUP153P49790 1475 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 MIA3Q5JRA6 1907 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 PLXNB3Q9ULL4 1909 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 LTBP4Q8N2S1 1624 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 FTCDNL1E5RQL4 147 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 SMLR1H3BR10 107 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 J3QRE1 110 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 CETN3O15182 167 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 NDUFS6O75380 124 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 OR4A8P0C604 315 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 RD3LP0DJH9 198 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 ZNF22P17026 224 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 PSMB3P49720 205 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 SULT1A2P50226 295 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 DAD1P61803 113 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 DYNLL1P63167 89 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 TSPAN31Q12999 210 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 DNAL1Q4LDG9 190 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 TRMT12Q53H54 448 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 PLEKHG7Q6ZR37 379 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 BLIDQ8IZY5 108 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 C2orf73Q8N5S3 287 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 ZFAND2AQ8N6M9 145 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 PHOSPHO2Q8TCD6 241 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 TNFAIP8L1Q8WVP5 186 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 EIF5A2Q9GZV4 153 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 WDR54Q9H977 334 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 SNX10Q9Y5X0 201 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 PUS1Q9Y606 427 aaKnown RBP eCLIP1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 ALG5Q9Y673 324 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 MTCH2Q9Y6C9 303 aa1.72□□□□□ -2.13
SMCHD1-209ENST00000583441 RAD50Q92878 1312 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 A8MWP6 167 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 CCRL2O00421 344 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 ZNF73O43830 326 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 STX10O60499 249 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 STK16O75716 305 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 ARL6IP5O75915 188 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 CD99P14209 185 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 NQO1P15559 274 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 CBR1P16152 277 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 HIST1H1CP16403 213 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 DOLPP1Q86YN1 238 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 NATD1Q8N6N6 113 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 OR10D4PQ8NGN7 298 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 OR4K13Q8NH42 304 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 C20orf166-AS1Q96NR2 134 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 GPR22Q99680 433 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 TMEM208Q9BTX3 173 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 MED18Q9BUE0 208 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 ZNF426Q9BUY5 554 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 LRRC19Q9H756 370 aa1.71□□□□□ -2.14
SMCHD1-209ENST00000583441 CLUHO75153 1309 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 IGKV1-12A0A0C4DH73 117 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 FABP12A6NFH5 140 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 ZNF878C9JN71 531 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 COPEO14579 308 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 ZW10O43264 779 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 CRTAPO75718 401 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 ATP6V1G2O95670 118 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 ASS1P00966 412 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 IGKV1D-12P01611 117 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 HBZP02008 142 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 IGHV3-30-3P0DP02 117 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 CD79BP40259 229 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 OR1E2P47887 323 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 SKP1P63208 163 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 SLC35A2P78381 396 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 LRRC26Q2I0M4 334 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 PRR14LQ5THK1 2151 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 ZNF322Q6U7Q0 402 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 SCXQ7RTU7 201 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 FAM9CQ8IZT9 166 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 YIPF7Q8N8F6 280 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 DNAAF3Q8N9W5 541 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 OR2V1Q8NHB1 315 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 ZNRF2Q8NHG8 242 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 ZCCHC13Q8WW36 166 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 ABHD14BQ96IU4 210 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 OR7D2Q96RA2 312 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 C7orf50Q9BRJ6 194 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 C1QTNF6Q9BXI9 259 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 HDHD2Q9H0R4 259 aa1.7□□□□□ -2.14
SMCHD1-209ENST00000583441 SDK2Q58EX2 2172 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 LOC102725191A0A1B0GVB3 256 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 IGSF23A1L1A6 192 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 C17orf98A8MV24 154 aa1.69□□□□□ -2.14
SMCHD1-209ENST00000583441 ITGB1BP1O14713 200 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms