RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 C17orf78Q8N4C9 275 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 ZFAND2AQ8N6M9 145 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 YIPF7Q8N8F6 280 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 DYNC2LI1Q8TCX1 351 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 PPWD1Q96BP3 646 aaKnown RBP2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 CAPZA3Q96KX2 299 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 HBEGFQ99075 208 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 CHST5Q9GZS9 411 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 MTCH2Q9Y6C9 303 aa2.24□□□□□ -2.05
SMARCE1-219ENST00000583294 ATG2BQ96BY7 2078 aa2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 FAM25EA8MYX2 175 aa2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 OVOL1O14753 267 aa2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 PHYHO14832 338 aa2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 ASS1P00966 412 aaKnown RBP2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 ORM2P19652 201 aa2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 PPP1CCP36873 323 aaKnown RBP2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 RAB8AP61006 207 aa2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 XRCC4Q13426 336 aa2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 PDK2Q15119 407 aa2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 TMEM176BQ3YBM2 270 aaPredicted RBP2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 SDIM1Q6ZPB5 146 aa2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 ATP6V1C2Q8NEY4 427 aa2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 ANGPTL6Q8NI99 470 aa2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 GTSF1LQ9H1H1 148 aa2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 SCML1Q9UN30 329 aa2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 ATAD5Q96QE3 1844 aa2.23□□□□□ -2.05
SMARCE1-219ENST00000583294 VPS37CA5D8V6 355 aaPredicted RBP2.22□□□□□ -2.05
SMARCE1-219ENST00000583294 UGT2B11O75310 529 aa2.22□□□□□ -2.05
SMARCE1-219ENST00000583294 PVALBP20472 110 aaPredicted RBP2.22□□□□□ -2.05
SMARCE1-219ENST00000583294 ADORA1P30542 326 aa2.22□□□□□ -2.05
SMARCE1-219ENST00000583294 SPAM1P38567 509 aa2.22□□□□□ -2.05
SMARCE1-219ENST00000583294 FAM3AP98173 230 aa2.22□□□□□ -2.05
SMARCE1-219ENST00000583294 GTF2BQ00403 316 aa2.22□□□□□ -2.05
SMARCE1-219ENST00000583294 TRMT12Q53H54 448 aaKnown RBP2.22□□□□□ -2.05
SMARCE1-219ENST00000583294 Q8NDZ9 215 aa2.22□□□□□ -2.05
SMARCE1-219ENST00000583294 MED10Q9BTT4 135 aa2.22□□□□□ -2.05
SMARCE1-219ENST00000583294 MED18Q9BUE0 208 aa2.22□□□□□ -2.05
SMARCE1-219ENST00000583294 ASCL3Q9NQ33 180 aa2.22□□□□□ -2.05
SMARCE1-219ENST00000583294 MS4A12Q9NXJ0 267 aa2.22□□□□□ -2.05
SMARCE1-219ENST00000583294 TMEM216Q9P0N5 145 aa2.22□□□□□ -2.05
SMARCE1-219ENST00000583294 CCL26Q9Y258 94 aa2.22□□□□□ -2.05
SMARCE1-219ENST00000583294 MAP3K19Q56UN5 1328 aa2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 C9J4A7 227 aa2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 SMLR1H3BR10 107 aa2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 NQO1P15559 274 aaKnown RBP2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 KDELR2P33947 212 aa2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 DLX6P56179 175 aa2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 KRTAP12-1P59990 96 aa2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 ACTBP60709 375 aa2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 ACTG1P63261 375 aa2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 TIMM23BQ5SRD1 257 aa2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 BOD1L2Q8IYS8 172 aa2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 OR4C16Q8NGL9 310 aa2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 TAMM41Q96BW9 452 aa2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 KLF6Q99612 283 aaPredicted RBP2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 TMEM106BQ9NUM4 274 aa2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 HEY1Q9Y5J3 304 aa2.21□□□□□ -2.06
SMARCE1-219ENST00000583294 H3BSA7 217 aa2.2□□□□□ -2.06
SMARCE1-219ENST00000583294 M0QYV0 167 aa2.2□□□□□ -2.06
SMARCE1-219ENST00000583294 TRAPPC3O43617 180 aa2.2□□□□□ -2.06
SMARCE1-219ENST00000583294 ZNF189O75820 626 aaPredicted RBP2.2□□□□□ -2.06
SMARCE1-219ENST00000583294 SOD1P00441 154 aa2.2□□□□□ -2.06
SMARCE1-219ENST00000583294 IFI30P13284 250 aa2.2□□□□□ -2.06
SMARCE1-219ENST00000583294 BLVRBP30043 206 aaPredicted RBP2.2□□□□□ -2.06
SMARCE1-219ENST00000583294 PSMB3P49720 205 aa2.2□□□□□ -2.06
SMARCE1-219ENST00000583294 OR5K1Q8NHB7 308 aa2.2□□□□□ -2.06
SMARCE1-219ENST00000583294 ERMNQ8TAM6 284 aa2.2□□□□□ -2.06
SMARCE1-219ENST00000583294 ACBD6Q9BR61 282 aa2.2□□□□□ -2.06
SMARCE1-219ENST00000583294 UGT2B28Q9BY64 529 aa2.2□□□□□ -2.06
SMARCE1-219ENST00000583294 FIS1Q9Y3D6 152 aa2.2□□□□□ -2.06
SMARCE1-219ENST00000583294 MINOS1-NBL1R4GNA1 71 aa2.2□□□□□ -2.06
SMARCE1-219ENST00000583294 MPDZO75970 2070 aa2.2□□□□□ -2.06
SMARCE1-219ENST00000583294 A0A0J9YX75 114 aa2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 ERICH2A1L162 156 aa2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 ODF3BA8MYP8 253 aa2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 HSBP1L1C9JCN9 74 aa2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 F5H5K5 113 aa2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 J3QKU1 62 aa2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 LIN7AO14910 233 aaPredicted RBP2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 NDUFS6O75380 124 aaKnown RBP2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 ZNF7P17097 686 aaPredicted RBP2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 AKR1C2P52895 323 aa2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 SLC35A2P78381 396 aa2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 PMS2P3Q13401 168 aa2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 C1DQ13901 141 aaKnown RBP2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 ZNHIT3Q15649 155 aaPredicted RBP2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 SLC13A5Q86YT5 568 aaPredicted RBP2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 CRLF3Q8IUI8 442 aa2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 TMEM75Q8N9X5 138 aa2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 OR52A5Q9H2C5 316 aa2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 DNAJC12Q9UKB3 198 aa2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 SORL1Q92673 2214 aa2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 CHD2O14647 1828 aaKnown RBP2.19□□□□□ -2.06
SMARCE1-219ENST00000583294 PTPRJQ12913 1337 aa2.18□□□□□ -2.06
SMARCE1-219ENST00000583294 MKRN2OSH3BPM6 223 aa2.18□□□□□ -2.06
SMARCE1-219ENST00000583294 IGKV1-16P04430 117 aa2.18□□□□□ -2.06
SMARCE1-219ENST00000583294 LPAR6P43657 344 aa2.18□□□□□ -2.06
SMARCE1-219ENST00000583294 STC1P52823 247 aa2.18□□□□□ -2.06
SMARCE1-219ENST00000583294 DEFB103AP81534 67 aa2.18□□□□□ -2.06
SMARCE1-219ENST00000583294 ZNF117Q03924 483 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms