RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 LEAP2Q969E1 77 aa16.28■□□□□ 0.2
TOP3A-213ENST00000582230 ZDHHC16Q969W1 377 aa16.28■□□□□ 0.2
TOP3A-213ENST00000582230 ZNF48Q96MX3 618 aaPredicted RBP16.28■□□□□ 0.2
TOP3A-213ENST00000582230 JMJD8Q96S16 334 aa16.28■□□□□ 0.2
TOP3A-213ENST00000582230 NXF2Q9GZY0 626 aaKnown RBP16.28■□□□□ 0.2
TOP3A-213ENST00000582230 MMP28Q9H239 520 aa16.28■□□□□ 0.2
TOP3A-213ENST00000582230 ZNF230Q9UIE0 474 aaPredicted RBP16.28■□□□□ 0.2
TOP3A-213ENST00000582230 AMMECR1Q9Y4X0 333 aaPredicted RBP16.28■□□□□ 0.2
TOP3A-213ENST00000582230 IGHV3-43A0A0B4J1X8 118 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 FABP7O15540 132 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 TCF21O43680 179 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 SSX5O60225 188 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 YPEL1O60688 119 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 DIRAS3O95661 229 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 SCTP09683 121 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 IGHV3-43DP0DP04 118 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 CEACAM3P40198 252 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 CBX5P45973 191 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 RIPPLY3P57055 190 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 MORN2Q502X0 79 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 LY6G6FQ5SQ64 297 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 UTF1Q5T230 341 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 LINC00311Q8N616 119 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 DTX3Q8N9I9 347 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 OR52L2PQ8NGH6 319 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 AJUBAQ96IF1 538 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 YPEL2Q96QA6 119 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 OCSTAMPQ9BR26 566 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 DCUN1D5Q9BTE7 237 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 ST6GALNAC5Q9BVH7 336 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 C6orf62Q9GZU0 229 aaPredicted RBP16.27■□□□□ 0.2
TOP3A-213ENST00000582230 DPM3Q9P2X0 92 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 A3GALT2U3KPV4 340 aa16.27■□□□□ 0.2
TOP3A-213ENST00000582230 LEUTXA8MZ59 168 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 BUB1B-PAK6H3BSN5 160 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 IGHV3-7P01780 117 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 HLA-DQB1P01920 261 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 ZBTB25P24278 435 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 PRSS3P35030 304 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 GNG10P50151 68 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 HILS1P60008 231 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 Q6YL49 198 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 C5orf24Q7Z6I8 188 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 LHFPL4Q7Z7J7 247 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 LDLRAD3Q86YD5 345 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 LAX1Q8IWV1 398 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 OR10V1Q8NGI7 309 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 C15orf40Q8WUR7 153 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 MEGF9Q9H1U4 602 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 MIXL1Q9H2W2 232 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 EXTL2Q9UBQ6 330 aa16.26■□□□□ 0.19
TOP3A-213ENST00000582230 MRPS7Q9Y2R9 242 aaKnown RBP16.26■□□□□ 0.19
TOP3A-213ENST00000582230 KIAA2026Q5HYC2 2103 aa16.25■□□□□ 0.19
TOP3A-213ENST00000582230 SVEP1Q4LDE5 3571 aa16.25■□□□□ 0.19
TOP3A-213ENST00000582230 MDFIC2A0A1B0GVS7 189 aa16.25■□□□□ 0.19
TOP3A-213ENST00000582230 FOXB2Q5VYV0 432 aa16.25■□□□□ 0.19
TOP3A-213ENST00000582230 SLC25A48Q6ZT89 311 aaKnown RBP16.25■□□□□ 0.19
TOP3A-213ENST00000582230 ZNF439Q8NDP4 499 aa16.25■□□□□ 0.19
TOP3A-213ENST00000582230 OR10X1Q8NGY0 326 aa16.25■□□□□ 0.19
TOP3A-213ENST00000582230 C17orf50Q8WW18 174 aa16.25■□□□□ 0.19
TOP3A-213ENST00000582230 MAFIPQ8WZ33 124 aa16.25■□□□□ 0.19
TOP3A-213ENST00000582230 MMP27Q9H306 513 aa16.25■□□□□ 0.19
TOP3A-213ENST00000582230 OOSP1A8MZH6 123 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 HSPA12AO43301 675 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 GSTT2P0CG29 244 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 GSTT2BP0CG30 244 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 PTHLHP12272 177 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 PPP1CCP36873 323 aaKnown RBP16.24■□□□□ 0.19
TOP3A-213ENST00000582230 BAMBIQ13145 260 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 MADCAM1Q13477 382 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 GNMTQ14749 295 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 SSX2Q16385 188 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 AANATQ16613 207 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 LDLRAD2Q5SZI1 272 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 HOGA1Q86XE5 327 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 SSMEM1Q8WWF3 244 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 CABLES2Q9BTV7 478 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 SCPEP1Q9HB40 452 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 ZNRD1Q9P1U0 126 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 RABL2AQ9UBK7 228 aaPredicted RBP16.24■□□□□ 0.19
TOP3A-213ENST00000582230 SLC23A1Q9UHI7 598 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 RABL2BQ9UNT1 228 aa16.24■□□□□ 0.19
TOP3A-213ENST00000582230 IGKV1-6A0A0C4DH72 117 aa16.23■□□□□ 0.19
TOP3A-213ENST00000582230 LY6LH3BQJ8 138 aa16.23■□□□□ 0.19
TOP3A-213ENST00000582230 CTXN2P0C2S0 81 aa16.23■□□□□ 0.19
TOP3A-213ENST00000582230 CEACAM6P40199 344 aa16.23■□□□□ 0.19
TOP3A-213ENST00000582230 CT45A1Q5HYN5 189 aa16.23■□□□□ 0.19
TOP3A-213ENST00000582230 FAM53AQ6NSI3 398 aaPredicted RBP16.23■□□□□ 0.19
TOP3A-213ENST00000582230 CNIH2Q6PI25 160 aa16.23■□□□□ 0.19
TOP3A-213ENST00000582230 PRIMA1Q86XR5 153 aa16.23■□□□□ 0.19
TOP3A-213ENST00000582230 OR10J5Q8NHC4 309 aa16.23■□□□□ 0.19
TOP3A-213ENST00000582230 CT45A3Q8NHU0 189 aa16.23■□□□□ 0.19
TOP3A-213ENST00000582230 DIRAS2Q96HU8 199 aa16.23■□□□□ 0.19
TOP3A-213ENST00000582230 DPAGT1Q9H3H5 408 aa16.23■□□□□ 0.19
TOP3A-213ENST00000582230 BATF3Q9NR55 127 aa16.23■□□□□ 0.19
TOP3A-213ENST00000582230 ANXA10Q9UJ72 324 aa16.23■□□□□ 0.19
TOP3A-213ENST00000582230 ANK3Q12955 4377 aaKnown RBP16.22■□□□□ 0.19
TOP3A-213ENST00000582230 IGKV1D-8A0A087WSZ0 117 aa16.22■□□□□ 0.19
TOP3A-213ENST00000582230 TRBV6-7A0A0A0MS04 114 aa16.22■□□□□ 0.19
TOP3A-213ENST00000582230 A0A1W2PPE3 182 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms