RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 GTF2H1P32780 548 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 CD151P48509 253 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 TTPAP49638 278 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 MP68P56378 58 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 MAP3K7CLP57077 242 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 OR2B6P58173 313 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 HTR4Q13639 388 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 ANGPT1Q15389 498 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 SYCP1Q15431 976 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 TPRXLQ17RH7 258 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 HBMQ6B0K9 141 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 SELENOHQ8IZQ5 122 aaKnown RBP0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 SYCE1Q8N0S2 351 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 OTUD6BQ8N6M0 293 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 YIPF7Q8N8F6 280 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 CASTOR1Q8WTX7 329 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 IFT81Q8WYA0 676 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 ATP6V1G3Q96LB4 118 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 TRNT1Q96Q11 434 aaKnown RBP0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 PITX2Q99697 317 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 APOL4Q9BPW4 351 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 EBPLQ9BY08 206 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 CD300AQ9UGN4 299 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 GMEB1Q9Y692 573 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 MTCH2Q9Y6C9 303 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 USH1CQ9Y6N9 552 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 MYO15BQ96JP2 1530 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 KIAA0232Q92628 1395 aa0.67□□□□□ -2.3
SMCHD1-206ENST00000581631 MPDZO75970 2070 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 DSCAML1Q8TD84 2053 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 ATG2BQ96BY7 2078 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 PLCH2O75038 1416 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 GOLGA8QA0A0J9YX86 632 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 TMEM213A2RRL7 107 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 A8MWP6 167 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 UGT2B11O75310 529 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 LDOC1O95751 146 aaPredicted RBP0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 SLC2A1P11166 492 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 NQO2P16083 231 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 GABRA3P34903 492 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 UGT2B10P36537 528 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 STX3Q13277 289 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 OR4D1Q15615 310 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 TRIP13Q15645 432 aaPredicted RBP0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 EXOC3L4Q17RC7 722 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 TMEM249Q2WGJ8 235 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 BSXQ3C1V8 233 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 HSP90B2PQ58FF3 399 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 EBLN2Q6P2I7 272 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 XKRXQ6PP77 449 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 Q6ZRN7 208 aaPredicted RBP0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 FAM183BPQ6ZVS7 135 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 COPS6Q7L5N1 327 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 OLIG3Q7RTU3 272 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 LRRC6Q86X45 466 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 ZFAND2AQ8N6M9 145 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 OR9I1Q8NGQ6 314 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 OR2Y1Q8NGV0 311 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 OR11L1Q8NGX0 322 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 ANGPTL6Q8NI99 470 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 SPPL2BQ8TCT7 592 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 CD200R1Q8TD46 325 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 DTD1Q8TEA8 209 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 RORBQ92753 470 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 CATSPER2Q96P56 530 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 HBEGFQ99075 208 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 HSPB9Q9BQS6 159 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 AGPAT3Q9NRZ7 376 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 COMMD9Q9P000 198 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 ENPP5Q9UJA9 477 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 CFAP45Q9UL16 551 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 HEY1Q9Y5J3 304 aa0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 LRPPRCP42704 1394 aaKnown RBP0.66□□□□□ -2.3
SMCHD1-206ENST00000581631 ADAMTSL1Q8N6G6 1762 aa0.65□□□□□ -2.3
SMCHD1-206ENST00000581631 TRAV8-2A0A0B4J237 113 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 IQCF5A8MTL0 148 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 F8VZ95 297 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 I3L4J1 428 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 PHYHO14832 338 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 LIN7AO14910 233 aaPredicted RBP0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 CETN3O15182 167 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 FABP7O15540 132 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 CYTH3O43739 400 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 CDK14O94921 469 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 NAPSAO96009 420 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 OCMP0CE72 109 aaPredicted RBP0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 ATF1P18846 271 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 PYCR1P32322 319 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 C1QTNF8P60827 252 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 CD164Q04900 197 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 FLOT2Q14254 428 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 PAFAH1B3Q15102 231 aaKnown RBP0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 OR10J3Q5JRS4 329 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 RBM48Q5RL73 367 aaKnown RBP0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 FAM162BQ5T6X4 162 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 LAMTOR1Q6IAA8 161 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 SDIM1Q6ZPB5 146 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 AHSA2Q719I0 299 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 OR4X1Q8NH49 305 aa0.65□□□□□ -2.31
SMCHD1-206ENST00000581631 OR5AK3PQ8NH89 298 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms