RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 TREM1Q9NP99 234 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 OR5B21A6NL26 309 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 A6NLC8 198 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 LINC00587B1AMM8 73 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 ACAA1P09110 424 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 NFYBP25208 207 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 HERV-K104P61576 105 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 IAH1Q2TAA2 248 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 IGSF11Q5DX21 431 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 FAM76BQ5HYJ3 339 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 CLEC2AQ6UVW9 174 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 ZNF573Q86YE8 665 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 C11orf53Q8IXP5 236 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 STOML3Q8TAV4 291 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 RTL8AQ9BWD3 113 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 FAM96BQ9Y3D0 163 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 CACNA1DQ01668 2161 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 HS3ST1O14792 307 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 OR4A8P0C604 315 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 FGF12P61328 243 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 C3orf36Q3SXR2 165 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 Q6ZPA2 131 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 TGIF2LYQ8IUE0 185 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 DMRTC2Q8IXT2 367 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 NANPQ8TBE9 248 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 RTN4IP1Q8WWV3 396 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 C2orf50Q96LR7 162 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 KCNIP3Q9Y2W7 256 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 CRYBG3Q68DQ2 2970 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 FBXO24O75426 580 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 IGHV3-13P01766 116 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 ADIPOQQ15848 244 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 FBXL19-AS1Q494R0 122 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 RPL7L1Q6DKI1 246 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 OR11L1Q8NGX0 322 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 ITLN2Q8WWU7 325 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 RDH5Q92781 318 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 MRPL24Q96A35 216 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 HRH4Q9H3N8 390 aa10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 ASH1LQ9NR48 2969 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-217ENST00000580287 KIAA2026Q5HYC2 2103 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 TACC2O95359 2948 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 AKAP6Q13023 2319 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 A0A1W2PPH5 198 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 CRYM-AS1A6NIL9 109 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 SHISA9B4DS77 424 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 HEXAP06865 529 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 OR5AC1P0C628 307 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 TPT1P13693 172 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 AADACP22760 399 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 RBM39Q14498 530 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 C4orf17Q53FE4 359 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 DHRS11Q6UWP2 260 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 BAP18Q8IXM2 172 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 BSCL2Q96G97 398 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 SEC11CQ9BY50 192 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 MMP26Q9NRE1 261 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 UQCC1Q9NVA1 299 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 E7EQL1 145 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 C19orf84I3L1E1 186 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 IFNA21P01568 189 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 RNF224P0DH78 156 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 CEBPDP49716 269 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 MST1LQ2TV78 715 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 SPIN3Q5JUX0 258 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 NCMAPQ5T1S8 102 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 SLC2A9Q9NRM0 540 aa10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 LSM5Q9Y4Y9 91 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-217ENST00000580287 IGLV3-9A0A075B6K5 115 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 LRP5LA4QPB2 252 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 C1QL1O75973 258 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 DIRAS3O95661 229 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 POLR2GP62487 172 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 HABP2Q14520 560 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 RNF141Q8WVD5 230 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 OR2V2Q96R30 315 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 ZNF705EA8MWA4 302 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 NUDT19A8MXV4 375 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 J3QT63 122 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 SLC33A1O00400 549 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 FAM157CP0CG43 387 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 PET100P0DJ07 73 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 ZNF44P15621 663 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 IL24Q13007 206 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 ZNF674Q2M3X9 581 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 FAM209BQ5JX69 171 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 FAM201AQ5SY85 155 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 GGNBP1Q5YKI7 109 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 PRSS54Q6PEW0 395 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 SLC16A13Q7RTY0 426 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 SAXO1Q8IYX7 474 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 ZNF843Q8N446 348 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 POC1AQ8NBT0 407 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 SECTM1Q8WVN6 248 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 CXXC4Q9H2H0 198 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 PLK3Q9H4B4 646 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 NAA60Q9H7X0 242 aa10.67□□□□□ -0.7
CDK5RAP3-217ENST00000580287 LRRK2Q5S007 2527 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 PHF1O43189 567 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 PPYP01298 95 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms