RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 ZNF69Q9UC07 566 aa8.83□□□□□ -1
SS18-213ENST00000579640 KPTNQ9Y664 436 aa8.83□□□□□ -1
SS18-213ENST00000579640 PRRC2AP48634 2157 aaKnown RBP8.83□□□□□ -1
SS18-213ENST00000579640 FAM240BA0A1B0GVZ2 78 aa8.82□□□□□ -1
SS18-213ENST00000579640 YPEL1O60688 119 aa8.82□□□□□ -1
SS18-213ENST00000579640 TUSC2O75896 110 aa8.82□□□□□ -1
SS18-213ENST00000579640 MSMBP08118 114 aa8.82□□□□□ -1
SS18-213ENST00000579640 SLC6A1P30531 599 aa8.82□□□□□ -1
SS18-213ENST00000579640 FCGR2CP31995 323 aa8.82□□□□□ -1
SS18-213ENST00000579640 LOXL3P58215 753 aa8.82□□□□□ -1
SS18-213ENST00000579640 SCGB2B2Q4G0G5 96 aa8.82□□□□□ -1
SS18-213ENST00000579640 PRAMEF5Q5TYX0 476 aa8.82□□□□□ -1
SS18-213ENST00000579640 C5orf24Q7Z6I8 188 aa8.82□□□□□ -1
SS18-213ENST00000579640 LHFPL1Q86WI0 220 aa8.82□□□□□ -1
SS18-213ENST00000579640 LINC01356Q8N9X3 169 aa8.82□□□□□ -1
SS18-213ENST00000579640 WFDC11Q8NEX6 87 aa8.82□□□□□ -1
SS18-213ENST00000579640 OR51S1Q8NGJ8 323 aa8.82□□□□□ -1
SS18-213ENST00000579640 TERB2Q8NHR7 220 aa8.82□□□□□ -1
SS18-213ENST00000579640 UBALD1Q8TB05 177 aa8.82□□□□□ -1
SS18-213ENST00000579640 ENKURQ8TC29 256 aa8.82□□□□□ -1
SS18-213ENST00000579640 EDARADDQ8WWZ3 215 aa8.82□□□□□ -1
SS18-213ENST00000579640 YPEL2Q96QA6 119 aa8.82□□□□□ -1
SS18-213ENST00000579640 SLC25A21Q9BQT8 299 aaPredicted RBP8.82□□□□□ -1
SS18-213ENST00000579640 ZNF2Q9BSG1 426 aaPredicted RBP8.82□□□□□ -1
SS18-213ENST00000579640 DPAGT1Q9H3H5 408 aa8.82□□□□□ -1
SS18-213ENST00000579640 RDH8Q9NYR8 311 aa8.82□□□□□ -1
SS18-213ENST00000579640 OR1A1Q9P1Q5 309 aa8.82□□□□□ -1
SS18-213ENST00000579640 ONECUT1Q9UBC0 465 aa8.82□□□□□ -1
SS18-213ENST00000579640 SESN1Q9Y6P5 492 aa8.82□□□□□ -1
SS18-213ENST00000579640 TRAV20A0A0B4J274 112 aa8.82□□□□□ -1
SS18-213ENST00000579640 ITGB1BP1O14713 200 aa8.82□□□□□ -1
SS18-213ENST00000579640 IGHV1-8P0DP01 117 aa8.82□□□□□ -1
SS18-213ENST00000579640 OMGP23515 440 aa8.82□□□□□ -1
SS18-213ENST00000579640 GATA3P23771 443 aa8.82□□□□□ -1
SS18-213ENST00000579640 BTCP35070 178 aa8.82□□□□□ -1
SS18-213ENST00000579640 CEACAM6P40199 344 aa8.82□□□□□ -1
SS18-213ENST00000579640 GZMKP49863 264 aa8.82□□□□□ -1
SS18-213ENST00000579640 DVL1P1P54792 670 aaPredicted RBP8.82□□□□□ -1
SS18-213ENST00000579640 ERVFRD-1P60508 538 aa8.82□□□□□ -1
SS18-213ENST00000579640 HERV-K104P61576 105 aa8.82□□□□□ -1
SS18-213ENST00000579640 IDO2Q6ZQW0 420 aa8.82□□□□□ -1
SS18-213ENST00000579640 C11orf42Q8N5U0 333 aa8.82□□□□□ -1
SS18-213ENST00000579640 OR52L2PQ8NGH6 319 aa8.82□□□□□ -1
SS18-213ENST00000579640 SCGB3A2Q96PL1 93 aa8.82□□□□□ -1
SS18-213ENST00000579640 OR2W1Q9Y3N9 320 aa8.82□□□□□ -1
SS18-213ENST00000579640 INSIG2Q9Y5U4 225 aa8.82□□□□□ -1
SS18-213ENST00000579640 PDZD2O15018 2839 aa8.81□□□□□ -1
SS18-213ENST00000579640 A0A087X0M5 115 aa8.81□□□□□ -1
SS18-213ENST00000579640 IGHV3-43A0A0B4J1X8 118 aa8.81□□□□□ -1
SS18-213ENST00000579640 A0A1B0GX30 115 aa8.81□□□□□ -1
SS18-213ENST00000579640 FAM172BPA6NC97 362 aa8.81□□□□□ -1
SS18-213ENST00000579640 PPYP01298 95 aa8.81□□□□□ -1
SS18-213ENST00000579640 IGHV3-43DP0DP04 118 aa8.81□□□□□ -1
SS18-213ENST00000579640 NFYAP23511 347 aaPredicted RBP8.81□□□□□ -1
SS18-213ENST00000579640 ARF6P62330 175 aa8.81□□□□□ -1
SS18-213ENST00000579640 RBMS2Q15434 407 aaKnown RBP8.81□□□□□ -1
SS18-213ENST00000579640 SURF2Q15527 256 aaPredicted RBP8.81□□□□□ -1
SS18-213ENST00000579640 LTC4SQ16873 150 aa8.81□□□□□ -1
SS18-213ENST00000579640 MORN2Q502X0 79 aa8.81□□□□□ -1
SS18-213ENST00000579640 METTL11BQ5VVY1 283 aa8.81□□□□□ -1
SS18-213ENST00000579640 C8orf31Q8N9H6 132 aa8.81□□□□□ -1
SS18-213ENST00000579640 MINDY2Q8NBR6 621 aa8.81□□□□□ -1
SS18-213ENST00000579640 DUSP18Q8NEJ0 188 aa8.81□□□□□ -1
SS18-213ENST00000579640 MOB3AQ96BX8 217 aa8.81□□□□□ -1
SS18-213ENST00000579640 METTL8Q9H825 291 aaKnown RBP8.81□□□□□ -1
SS18-213ENST00000579640 UNKLQ9H9P5 680 aaKnown RBP8.81□□□□□ -1
SS18-213ENST00000579640 MMP26Q9NRE1 261 aa8.81□□□□□ -1
SS18-213ENST00000579640 YLPM1P49750 1951 aaKnown RBP8.8□□□□□ -1
SS18-213ENST00000579640 MMP23AO75900 390 aa8.8□□□□□ -1
SS18-213ENST00000579640 NDUFB6O95139 128 aa8.8□□□□□ -1
SS18-213ENST00000579640 AADACP22760 399 aa8.8□□□□□ -1
SS18-213ENST00000579640 PRTN3P24158 256 aa8.8□□□□□ -1
SS18-213ENST00000579640 NFYBP25208 207 aa8.8□□□□□ -1
SS18-213ENST00000579640 CD34P28906 385 aa8.8□□□□□ -1
SS18-213ENST00000579640 PPP1CCP36873 323 aaKnown RBP8.8□□□□□ -1
SS18-213ENST00000579640 RAB7AP51149 207 aa8.8□□□□□ -1
SS18-213ENST00000579640 CCR6P51684 374 aa8.8□□□□□ -1
SS18-213ENST00000579640 LUMP51884 338 aaPredicted RBP8.8□□□□□ -1
SS18-213ENST00000579640 UCP3P55916 312 aa8.8□□□□□ -1
SS18-213ENST00000579640 GNMTQ14749 295 aa8.8□□□□□ -1
SS18-213ENST00000579640 TMEM249Q2WGJ8 235 aa8.8□□□□□ -1
SS18-213ENST00000579640 PLA1AQ53H76 456 aa8.8□□□□□ -1
SS18-213ENST00000579640 AADACL3Q5VUY0 350 aa8.8□□□□□ -1
SS18-213ENST00000579640 LPCAT3Q6P1A2 487 aa8.8□□□□□ -1
SS18-213ENST00000579640 NRARPQ7Z6K4 114 aa8.8□□□□□ -1
SS18-213ENST00000579640 OR2AK2Q8NG84 335 aa8.8□□□□□ -1
SS18-213ENST00000579640 OR10V1Q8NGI7 309 aa8.8□□□□□ -1
SS18-213ENST00000579640 OR13C8Q8NGS7 320 aa8.8□□□□□ -1
SS18-213ENST00000579640 TMEM133Q9H2Q1 129 aa8.8□□□□□ -1
SS18-213ENST00000579640 LPAR2Q9HBW0 351 aa8.8□□□□□ -1
SS18-213ENST00000579640 OR5H14A6NHG9 310 aa8.8□□□□□ -1
SS18-213ENST00000579640 SLC22A5O76082 557 aa8.8□□□□□ -1
SS18-213ENST00000579640 PAX8Q06710 450 aa8.8□□□□□ -1
SS18-213ENST00000579640 GLCCI1Q86VQ1 547 aa8.8□□□□□ -1
SS18-213ENST00000579640 Q8N7P7 452 aa8.8□□□□□ -1
SS18-213ENST00000579640 ZDHHC22Q8N966 263 aa8.8□□□□□ -1
SS18-213ENST00000579640 OR13D1Q8NGV5 346 aa8.8□□□□□ -1
SS18-213ENST00000579640 TNFRSF14Q92956 283 aa8.8□□□□□ -1
SS18-213ENST00000579640 TMEM186Q96B77 213 aa8.8□□□□□ -1
SS18-213ENST00000579640 SUCNR1Q9BXA5 334 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms