RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 V9GY05 133 aa11.84□□□□□ -0.51
SS18-212ENST00000579061 IGHV1-3A0A0C4DH29 117 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 TRDV1A0A1B0GX56 115 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 CCRL2O00421 344 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 FGF16O43320 207 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 TXNL1O43396 289 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 TSPAN15O95858 294 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 LPLP06858 475 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 BLVRBP30043 206 aaPredicted RBP11.83□□□□□ -0.52
SS18-212ENST00000579061 HTD2P86397 168 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 ABCA11PQ4W5N1 156 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 UBE2UQ5VVX9 321 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 C6orf201Q7Z4U5 140 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 NICN1Q9BSH3 213 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 FAAP24Q9BTP7 215 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 LPAR5Q9H1C0 372 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 RIMS4Q9H426 269 aaPredicted RBP11.83□□□□□ -0.52
SS18-212ENST00000579061 KCNK15Q9H427 330 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 OR2S2Q9NQN1 319 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 PLEKHJ1Q9NW61 149 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 JPT1Q9UK76 154 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 HSF4Q9ULV5 492 aa11.83□□□□□ -0.52
SS18-212ENST00000579061 A0A0A6YYD4 124 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 PDCD5O14737 125 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 NAPSAO96009 420 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 TMEM11P17152 192 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 CD1BP29016 333 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 HES1Q14469 280 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 P2RY14Q15391 338 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 HMGN3Q15651 99 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 MORN2Q502X0 79 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 CT45A1Q5HYN5 189 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 ZNF880Q6PDB4 577 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 MOB1BQ7L9L4 216 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 MOB3BQ86TA1 216 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 IZUMO1Q8IYV9 350 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 PRR18Q8N4B5 295 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 C11orf44Q8N8P7 122 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 CT45A3Q8NHU0 189 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 RTN4IP1Q8WWV3 396 aaPredicted RBP11.82□□□□□ -0.52
SS18-212ENST00000579061 FCGR1BQ92637 280 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 FAM3DQ96BQ1 224 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 GALMQ96C23 342 aa11.82□□□□□ -0.52
SS18-212ENST00000579061 TRBV6-6A0A0A6YYG2 114 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 FOXI3A8MTJ6 420 aaPredicted RBP11.81□□□□□ -0.52
SS18-212ENST00000579061 LDLRAD4O15165 306 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 SLC31A2O15432 143 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 YPEL1O60688 119 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 RGS11O94810 467 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 IGKV1D-33P01593 117 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 IGKV1-33P01594 117 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 CD28P10747 220 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 ZNF134P52741 427 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 TMEM95Q3KNT9 176 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 C2orf76Q3KRA6 126 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 FAM53AQ6NSI3 398 aaPredicted RBP11.81□□□□□ -0.52
SS18-212ENST00000579061 NDUFA11Q86Y39 141 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 SPARTQ8N0X7 666 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 OR51D1Q8NGF3 324 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 OR10V1Q8NGI7 309 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 CYYR1Q96J86 154 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 YPEL2Q96QA6 119 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 STEAP1Q9UHE8 339 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 MGAT4AQ9UM21 535 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 MEGF8Q7Z7M0 2845 aa11.81□□□□□ -0.52
SS18-212ENST00000579061 PLXNB1O43157 2135 aa11.8□□□□□ -0.52
SS18-212ENST00000579061 SOCS1O15524 211 aa11.8□□□□□ -0.52
SS18-212ENST00000579061 LANCL1O43813 399 aa11.8□□□□□ -0.52
SS18-212ENST00000579061 MYL9P24844 172 aa11.8□□□□□ -0.52
SS18-212ENST00000579061 REG1BP48304 166 aa11.8□□□□□ -0.52
SS18-212ENST00000579061 TMEM50BP56557 158 aa11.8□□□□□ -0.52
SS18-212ENST00000579061 TGIF2LXQ8IUE1 241 aa11.8□□□□□ -0.52
SS18-212ENST00000579061 Q8N6K4 173 aa11.8□□□□□ -0.52
SS18-212ENST00000579061 C5orf56Q8N8D9 126 aa11.8□□□□□ -0.52
SS18-212ENST00000579061 OR5AU1Q8NGC0 362 aa11.8□□□□□ -0.52
SS18-212ENST00000579061 OR52L2PQ8NGH6 319 aa11.8□□□□□ -0.52
SS18-212ENST00000579061 OR56B1Q8NGI3 324 aa11.8□□□□□ -0.52
SS18-212ENST00000579061 OR2T10Q8NGZ9 312 aa11.8□□□□□ -0.52
SS18-212ENST00000579061 FAM110DQ8TAY7 271 aaPredicted RBP11.8□□□□□ -0.52
SS18-212ENST00000579061 ABRACLQ9P1F3 81 aa11.8□□□□□ -0.52
SS18-212ENST00000579061 RAB22AQ9UL26 194 aa11.8□□□□□ -0.52
SS18-212ENST00000579061 RAB3BP20337 219 aa11.79□□□□□ -0.52
SS18-212ENST00000579061 FGF9P31371 208 aaPredicted RBP11.79□□□□□ -0.52
SS18-212ENST00000579061 VEGFCP49767 419 aa11.79□□□□□ -0.52
SS18-212ENST00000579061 CLDN12P56749 244 aa11.79□□□□□ -0.52
SS18-212ENST00000579061 CD83Q01151 205 aa11.79□□□□□ -0.52
SS18-212ENST00000579061 HNF4GQ14541 408 aa11.79□□□□□ -0.52
SS18-212ENST00000579061 CENPVQ7Z7K6 275 aaPredicted RBP11.79□□□□□ -0.52
SS18-212ENST00000579061 EAF1Q96JC9 268 aaPredicted RBP11.79□□□□□ -0.52
SS18-212ENST00000579061 CITED2Q99967 270 aaPredicted RBP11.79□□□□□ -0.52
SS18-212ENST00000579061 ABHD14AQ9BUJ0 271 aa11.79□□□□□ -0.52
SS18-212ENST00000579061 CHMP1AQ9HD42 196 aaPredicted RBP11.79□□□□□ -0.52
SS18-212ENST00000579061 NOTCH1P46531 2555 aa11.79□□□□□ -0.52
SS18-212ENST00000579061 TMEM272A0A1B0GTI8 110 aa11.78□□□□□ -0.52
SS18-212ENST00000579061 SHISA3A0PJX4 238 aa11.78□□□□□ -0.52
SS18-212ENST00000579061 IFITM5A6NNB3 132 aa11.78□□□□□ -0.52
SS18-212ENST00000579061 ADARB2-AS1A8MUL3 147 aa11.78□□□□□ -0.52
SS18-212ENST00000579061 OPN1MWP04001 364 aa11.78□□□□□ -0.52
SS18-212ENST00000579061 OPN1MW2P0DN77 364 aa11.78□□□□□ -0.52
SS18-212ENST00000579061 OPN1MW3P0DN78 364 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms