RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 OR3A4PP47883 348 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 MARCKSL1P49006 195 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 SRP9P49458 86 aaKnown RBP3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 GZMMP51124 257 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 TDGF1P3P51864 188 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 NCBP2P52298 156 aaKnown RBP eCLIP3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 ZNF138P52744 262 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 SYNJ2BPP57105 145 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 LINC01547P58512 204 aaPredicted RBP3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 EGFEM1PQ0D2K5 195 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 KLF9Q13886 244 aaPredicted RBP3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 BATFQ16520 125 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 FKBP1CQ5VVH2 108 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 KDM4DQ6B0I6 523 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 CLEC19AQ6UXS0 136 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 ZNF493Q6ZR52 646 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 NEGR1Q7Z3B1 354 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 C6orf120Q7Z4R8 191 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 ZCCHC24Q8N2G6 241 aaKnown RBP3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 OR13D1Q8NGV5 346 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 OR10G6Q8NH81 332 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 MCFD2Q8NI22 146 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 SLC45A3Q96JT2 553 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 SMIM8Q96KF7 97 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 GINS3Q9BRX5 216 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 EBPLQ9BY08 206 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 KRTAP4-5Q9BYR2 181 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 PARP12Q9H0J9 701 aaKnown RBP3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 LINC00597Q9H2U6 94 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 EDA2RQ9HAV5 297 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 ENY2Q9NPA8 101 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 SPANXA1Q9NS26 97 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 OPTCQ9UBM4 332 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 CTSZQ9UBR2 303 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 C14orf166Q9Y224 244 aaKnown RBP3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 UFC1Q9Y3C8 167 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 FAM32AQ9Y421 112 aaKnown RBP3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 FLVCR1Q9Y5Y0 555 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 DOCK1Q14185 1865 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 CDK5RAP2Q96SN8 1893 aa3.24□□□□□ -1.89
GAPLINC-201ENST00000578664 LTBP2Q14767 1821 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 COL2A1P02458 1487 aaPredicted RBP3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 GREB1LQ9C091 1923 aaPredicted RBP3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 ZNFX1Q9P2E3 1918 aaKnown RBP3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 A0A0G2JN53 185 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 A0A1B0GV50 99 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 EXOC1LA0A1B0GW35 172 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 PRORSD1PA6NEY8 169 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 SMCHD1A6NHR9 2005 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 UPK1AO00322 258 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 ARPC5O15511 151 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 MED6O75586 246 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 GCM2O75603 506 aaPredicted RBP3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 KBTBD11O94819 623 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 IGHG2P01859 326 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 SULT1A3P0DMM9 295 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 SULT1A4P0DMN0 295 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 OR13C7P0DN81 318 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 DMDP11532 3685 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 ZNF708P17019 499 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 PRTN3P24158 256 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 PRSS3P35030 304 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 CDKN2BP42772 138 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 RPL34P49207 117 aaKnown RBP3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 SLC25A1P53007 311 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 SLC18A1P54219 525 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 RIPPLY3P57055 190 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 TAS2R46P59540 309 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 SNAP25P60880 206 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 CDC42P60953 191 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 UBE2NP61088 152 aaKnown RBP3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 GNB1P62873 340 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 IFITM3Q01628 133 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 HERPUD1Q15011 391 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 Q499Y3 187 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 FBXW9Q5XUX1 488 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 C11orf87Q6NUJ2 197 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 FBXW12Q6X9E4 464 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 C9orf47Q6ZRZ4 202 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 STRADAQ7RTN6 431 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 ZNF550Q7Z398 422 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 GRINAQ7Z429 371 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 NAA40Q86UY6 237 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 SMIM20Q8N5G0 67 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 OR13C6PQ8NH95 151 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 FAM151AQ8WW52 585 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 C12orf43Q96C57 262 aaKnown RBP3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 ZNF501Q96CX3 271 aaPredicted RBP3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 LRRC58Q96CX6 371 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 ACY3Q96HD9 319 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 SLC35G5Q96KT7 338 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 SIGLEC12Q96PQ1 595 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 SPACA5Q96QH8 159 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 RTBDNQ9BSG5 229 aaPredicted RBP3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 Q9H3A6 140 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 ZNF702PQ9H963 129 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 CCL28Q9NRJ3 127 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 RBFOX1Q9NWB1 397 aaKnown RBP3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 MYO15AQ9UKN7 3530 aa3.23□□□□□ -1.89
GAPLINC-201ENST00000578664 MYO5AQ9Y4I1 1855 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms