RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 TRDCB7Z8K6 153 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 WNT9BO14905 357 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 EGR1P18146 543 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 CFPP27918 469 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 HABP2Q14520 560 aaPredicted RBP11.69□□□□□ -0.54
NDEL1-204ENST00000578172 WDR25Q64LD2 544 aaPredicted RBP11.69□□□□□ -0.54
NDEL1-204ENST00000578172 RAB39BQ96DA2 213 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 WFIKKN1Q96NZ8 548 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 ATG101Q9BSB4 218 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 TRBV6-7A0A0A0MS04 114 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 TGIF2-C20orf24A0A0A6YYL0 155 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 A0A0G2JRQ6 117 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 MEOX1P50221 254 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 DLK1P80370 383 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 RNF151Q2KHN1 245 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 MRGPRDQ8TDS7 321 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 KCNE4Q8WWG9 221 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 IER2Q9BTL4 223 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 DOK5Q9P104 306 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 MT-CO3P00414 261 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 FKBP2P26885 142 aaKnown RBP11.68□□□□□ -0.54
NDEL1-204ENST00000578172 OR3A1P47881 315 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 GAMTQ14353 236 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 ZNF787Q6DD87 383 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 MDP1Q86V88 176 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 COMMD1Q8N668 190 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 SAMD10Q9BYL1 202 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 VSIRQ9H7M9 311 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 WDR54Q9H977 334 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 COA4Q9NYJ1 87 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 COLCA2A8K830 154 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 HEXAP06865 529 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 DANCRP0C864 163 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 BAXQ07812 192 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 AESQ08117 197 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 KCNMB1Q16558 191 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 ZNF709Q8N972 641 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 DMBX1Q8NFW5 382 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 MALSU1Q96EH3 234 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 TRIB1Q96RU8 372 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 TTTY12Q9BZ98 90 aa11.68□□□□□ -0.54
NDEL1-204ENST00000578172 PPP5D1E7EU14 171 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 OPN1MWP04001 364 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 SNRPCP09234 159 aaKnown RBP11.67□□□□□ -0.54
NDEL1-204ENST00000578172 OPN1MW2P0DN77 364 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 OPN1MW3P0DN78 364 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 MPLP40238 635 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 ECI1P42126 302 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 ZNF66Q6ZN08 573 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 SELENOHQ8IZQ5 122 aaKnown RBP11.67□□□□□ -0.54
NDEL1-204ENST00000578172 APOBEC3DQ96AK3 386 aaPredicted RBP11.67□□□□□ -0.54
NDEL1-204ENST00000578172 TMEM222Q9H0R3 208 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 TMEM100Q9NV29 134 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 CARHSP1Q9Y2V2 147 aaKnown RBP11.67□□□□□ -0.54
NDEL1-204ENST00000578172 POMT1Q9Y6A1 747 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 PQLC2LA1A4F0 135 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 RPL36A-HNRNPH2H7BZ11 118 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 TMEM50AO95807 157 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 DTYMKP23919 212 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 G6PCP35575 357 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 PRAMEF6Q5VXH4 476 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 C1orf210Q8IVY1 113 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 GPR146Q96CH1 333 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 BOD1Q96IK1 185 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 ADGRG7Q96K78 797 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 FBLN5Q9UBX5 448 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 CLN8Q9UBY8 286 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 INTS1Q8N201 2190 aaKnown RBP11.67□□□□□ -0.54
NDEL1-204ENST00000578172 KIR2DS1A0A191URI9 304 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 SERPINA7P05543 415 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 KIR2DS4P43632 304 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 EDDM3BP56851 147 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 KIR2DS1Q14954 304 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 PACRGQ96M98 296 aaPredicted RBP11.67□□□□□ -0.54
NDEL1-204ENST00000578172 DCTN5Q9BTE1 182 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 CD55P08174 381 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 SRSF6Q13247 344 aaKnown RBP11.67□□□□□ -0.54
NDEL1-204ENST00000578172 SLC10A1Q14973 349 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 Q6ZPA2 131 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 SNIP1Q8TAD8 396 aaKnown RBP11.67□□□□□ -0.54
NDEL1-204ENST00000578172 LHX4Q969G2 390 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 ABHD14BQ96IU4 210 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 FAM210BQ96KR6 192 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 SLC39A9Q9NUM3 307 aa11.67□□□□□ -0.54
NDEL1-204ENST00000578172 SRSF4Q08170 494 aaKnown RBP11.66□□□□□ -0.54
NDEL1-204ENST00000578172 IL13RA2Q14627 380 aa11.66□□□□□ -0.54
NDEL1-204ENST00000578172 IGLV3-32A0A0A0MS00 114 aa11.66□□□□□ -0.54
NDEL1-204ENST00000578172 NDUFA2O43678 99 aa11.66□□□□□ -0.54
NDEL1-204ENST00000578172 ZNF25P17030 456 aaPredicted RBP11.66□□□□□ -0.54
NDEL1-204ENST00000578172 HERPUD1Q15011 391 aa11.66□□□□□ -0.54
NDEL1-204ENST00000578172 CLEC18AA5D8T8 446 aa11.66□□□□□ -0.54
NDEL1-204ENST00000578172 PGLYRP1O75594 196 aaPredicted RBP11.66□□□□□ -0.54
NDEL1-204ENST00000578172 RAC2P15153 192 aa11.66□□□□□ -0.54
NDEL1-204ENST00000578172 TLE4Q04727 773 aa11.66□□□□□ -0.54
NDEL1-204ENST00000578172 CLEC18CQ8NCF0 446 aa11.66□□□□□ -0.54
NDEL1-204ENST00000578172 SF3B5Q9BWJ5 86 aaKnown RBP11.66□□□□□ -0.54
NDEL1-204ENST00000578172 OR2D2Q9H210 308 aa11.66□□□□□ -0.54
NDEL1-204ENST00000578172 CEP295Q9C0D2 2601 aa11.66□□□□□ -0.54
NDEL1-204ENST00000578172 H7BYZ3 331 aa11.65□□□□□ -0.54
NDEL1-204ENST00000578172 TIMM8AO60220 97 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms