RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 ZNF134P52741 427 aa15.51■□□□□ 0.07
SS18-208ENST00000577751 PROK1P58294 105 aa15.51■□□□□ 0.07
SS18-208ENST00000577751 DIAPH2-AS1Q14236 149 aa15.51■□□□□ 0.07
SS18-208ENST00000577751 MOGAT2Q3SYC2 334 aa15.51■□□□□ 0.07
SS18-208ENST00000577751 SFXN4Q6P4A7 337 aa15.51■□□□□ 0.07
SS18-208ENST00000577751 SLC25A48Q6ZT89 311 aaKnown RBP15.51■□□□□ 0.07
SS18-208ENST00000577751 TMEM219Q86XT9 240 aa15.51■□□□□ 0.07
SS18-208ENST00000577751 RPEQ96AT9 228 aa15.51■□□□□ 0.07
SS18-208ENST00000577751 JPT1Q9UK76 154 aa15.51■□□□□ 0.07
SS18-208ENST00000577751 KCNK7Q9Y2U2 307 aa15.51■□□□□ 0.07
SS18-208ENST00000577751 RNF114Q9Y508 228 aa15.51■□□□□ 0.07
SS18-208ENST00000577751 CLEC2LP0C7M8 214 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 MNDAP41218 407 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 RAB7AP51149 207 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 MXD1Q05195 221 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 TIMM50Q3ZCQ8 353 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 MORN2Q502X0 79 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 CT45A1Q5HYN5 189 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 LY6G6FQ5SQ64 297 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 STEAP3Q658P3 488 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 SHISA2Q6UWI4 295 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 OR10R2Q8NGX6 335 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 OR10X1Q8NGY0 326 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 CT45A3Q8NHU0 189 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 TOMM40LQ969M1 308 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 ST6GALNAC6Q969X2 333 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 GALMQ96C23 342 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 RAB3CQ96E17 227 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 HDHD3Q9BSH5 251 aaPredicted RBP15.5■□□□□ 0.07
SS18-208ENST00000577751 OR2S2Q9NQN1 319 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 GNG12Q9UBI6 72 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 DAPK2Q9UIK4 370 aa15.5■□□□□ 0.07
SS18-208ENST00000577751 A0A1W2PPI3 338 aa15.49■□□□□ 0.07
SS18-208ENST00000577751 FAM90A9PA6NNJ1 464 aa15.49■□□□□ 0.07
SS18-208ENST00000577751 HAX1O00165 279 aa15.49■□□□□ 0.07
SS18-208ENST00000577751 SLC31A2O15432 143 aa15.49■□□□□ 0.07
SS18-208ENST00000577751 YPEL1O60688 119 aa15.49■□□□□ 0.07
SS18-208ENST00000577751 CD24P25063 80 aa15.49■□□□□ 0.07
SS18-208ENST00000577751 ZNF816Q0VGE8 651 aaPredicted RBP15.49■□□□□ 0.07
SS18-208ENST00000577751 MOB1BQ7L9L4 216 aa15.49■□□□□ 0.07
SS18-208ENST00000577751 OR8H3Q8N146 312 aa15.49■□□□□ 0.07
SS18-208ENST00000577751 OR52L2PQ8NGH6 319 aa15.49■□□□□ 0.07
SS18-208ENST00000577751 OR10V1Q8NGI7 309 aa15.49■□□□□ 0.07
SS18-208ENST00000577751 WFDC12Q8WWY7 111 aa15.49■□□□□ 0.07
SS18-208ENST00000577751 CFHR4Q92496 578 aa15.49■□□□□ 0.07
SS18-208ENST00000577751 YPEL2Q96QA6 119 aa15.49■□□□□ 0.07
SS18-208ENST00000577751 NPFFR1Q9GZQ6 430 aa15.49■□□□□ 0.07
SS18-208ENST00000577751 CHMP1AQ9HD42 196 aaPredicted RBP15.49■□□□□ 0.07
SS18-208ENST00000577751 METTL21EPA6NDL7 271 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 MFNGO00587 321 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 AIREO43918 545 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 SMIM18P0DKX4 95 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 ZNF137PP52743 207 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 HABP2Q14520 560 aaPredicted RBP15.48■□□□□ 0.07
SS18-208ENST00000577751 GNMTQ14749 295 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 FBLN7Q53RD9 439 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 C16orf82Q7Z2V1 217 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 THNSL2Q86YJ6 484 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 Q8N2B8 174 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 DTX3Q8N9I9 347 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 OR4C13Q8NGP0 309 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 CMSS1Q9BQ75 279 aaKnown RBP15.48■□□□□ 0.07
SS18-208ENST00000577751 Q9N2K0 584 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 C12orf4Q9NQ89 552 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 ABRACLQ9P1F3 81 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 MGAT4AQ9UM21 535 aa15.48■□□□□ 0.07
SS18-208ENST00000577751 HSD17B6O14756 317 aa15.47■□□□□ 0.07
SS18-208ENST00000577751 TIMM23O14925 209 aa15.47■□□□□ 0.07
SS18-208ENST00000577751 GAPDHP04406 335 aaKnown RBP15.47■□□□□ 0.07
SS18-208ENST00000577751 SNRPBP14678 240 aaKnown RBP15.47■□□□□ 0.07
SS18-208ENST00000577751 SCAND1P57086 179 aa15.47■□□□□ 0.07
SS18-208ENST00000577751 SETD6Q8TBK2 473 aa15.47■□□□□ 0.07
SS18-208ENST00000577751 ZNF702PQ9H963 129 aa15.47■□□□□ 0.07
SS18-208ENST00000577751 TMEM127O75204 238 aa15.46■□□□□ 0.07
SS18-208ENST00000577751 HIST1H1DP16402 221 aaKnown RBP15.46■□□□□ 0.07
SS18-208ENST00000577751 PPP1CCP36873 323 aaKnown RBP15.46■□□□□ 0.07
SS18-208ENST00000577751 TGFBR1P36897 503 aa15.46■□□□□ 0.07
SS18-208ENST00000577751 KRTAP10-3P60369 221 aa15.46■□□□□ 0.07
SS18-208ENST00000577751 DRAM1Q8N682 238 aa15.46■□□□□ 0.07
SS18-208ENST00000577751 OR13F1Q8NGS4 319 aa15.46■□□□□ 0.07
SS18-208ENST00000577751 OR56B4Q8NH76 319 aa15.46■□□□□ 0.07
SS18-208ENST00000577751 RBM14Q96PK6 669 aaKnown RBP15.46■□□□□ 0.07
SS18-208ENST00000577751 ATG5Q9H1Y0 275 aa15.46■□□□□ 0.07
SS18-208ENST00000577751 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.46■□□□□ 0.07
SS18-208ENST00000577751 IGHV1-3A0A0C4DH29 117 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 SERPINE3A8MV23 424 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 RGS11O94810 467 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 OR2F2O95006 317 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 FAM106CPP0CH98 169 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 GNB3P16520 340 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 IL3RAP26951 378 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 BLCAPP62952 87 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 HLA-DRB3P79483 266 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 SRSF4Q08170 494 aaKnown RBP15.45■□□□□ 0.06
SS18-208ENST00000577751 C11orf88Q6PI97 169 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 OR2T6Q8NHC8 308 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 LGALS14Q8TCE9 139 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 CAPSLQ8WWF8 208 aa15.45■□□□□ 0.06
SS18-208ENST00000577751 RTN4IP1Q8WWV3 396 aaPredicted RBP15.45■□□□□ 0.06
SS18-208ENST00000577751 IL1F10Q8WWZ1 152 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms