RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 C15orf54Q8N8G6 183 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 CHST4Q8NCG5 386 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 OR52L1Q8NGH7 329 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 OR9I1Q8NGQ6 314 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 OR10R2Q8NGX6 335 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 OR13G1Q8NGZ3 307 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 SYNPRQ8TBG9 265 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 RAB2BQ8WUD1 216 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 ASB13Q8WXK3 278 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 OR8D1Q8WZ84 308 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 GPR146Q96CH1 333 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 SMIM19Q96E16 107 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 GALNT14Q96FL9 552 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 DNAJC30Q96LL9 226 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 RNF157Q96PX1 679 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 NRIP2Q9BQI9 281 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 CBWD1Q9BRT8 395 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 LXNQ9BS40 222 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 NDFIP1Q9BT67 221 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 TAPBPLQ9BX59 468 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 RHOJQ9H4E5 214 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 ZDHHC11Q9H8X9 412 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 NHEJ1Q9H9Q4 299 aaPredicted RBP2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 UBQLN4Q9NRR5 601 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 RBFOX1Q9NWB1 397 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 CLN6Q9NWW5 311 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 SCN3BQ9NY72 215 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 MRPL27Q9P0M9 148 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 COMMD3Q9UBI1 195 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 OPTCQ9UBM4 332 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 AK6Q9Y3D8 172 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 CAMSAP1Q5T5Y3 1602 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 GRIN2AQ12879 1464 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 SNAPC4Q5SXM2 1469 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 IGSF9BQ9UPX0 1349 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 SYNMO15061 1565 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 OVOS2A0A0G2JMS6 1433 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 LOC102724200A0A096LPH7 203 aaPredicted RBP2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 ARL5CA6NH57 179 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 OR4C46A6NHA9 309 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 OR5H1A6NKK0 313 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 FAM159BA6NKW6 160 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 CLDN5O00501 218 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 DEGS1O15121 323 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 HCRTR1O43613 425 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 HSBP1O75506 76 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 CNMDO75829 334 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 STK17BO94768 372 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 YIF1AO95070 293 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 CD160O95971 181 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 CRYGDP07320 174 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 UCHL1P09936 223 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 UBBP0CG47 229 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 LIMS3P0CW19 117 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 LIMS4P0CW20 117 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 ABOP16442 354 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 RPS3P23396 243 aaKnown RBP eCLIP2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 CD1CP29017 333 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 NTSP30990 170 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 GLRXP35754 106 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 GPR1P46091 355 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 RPL29P47914 159 aaKnown RBP2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 TFPI2P48307 235 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 LHX2P50458 406 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 STC1P52823 247 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 AKR1C2P52895 323 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 DEFA1P59665 94 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 DEFA3P59666 94 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 EWSR1Q01844 656 aaKnown RBP eCLIP2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 HIST1H1AQ02539 215 aaPredicted RBP2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 SMAGPQ0VAQ4 97 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 PEA15Q15121 130 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 LGALSLQ3ZCW2 172 aaPredicted RBP2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 MORN2Q502X0 79 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 TMEM97Q5BJF2 176 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 C1orf194Q5T5A4 169 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 TMEM215Q68D42 235 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 STUMQ69YW2 141 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 C22orf42Q6IC83 251 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 ALKAL1Q6UXT8 129 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 DNM1P46Q6ZS02 220 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 OR8I2Q8N0Y5 310 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF567Q8N184 647 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 OSR2Q8N2R0 312 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 PNKDQ8N490 385 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 TSTD1Q8NFU3 115 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 VN1R2Q8NFZ6 395 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 OR5AU1Q8NGC0 362 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 OR10G4Q8NGN3 311 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 OR2T4Q8NH00 348 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 OR51Q1Q8NH59 317 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 FNDC9Q8TBE3 224 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF431Q8TF32 576 aaPredicted RBP2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 CANT1Q8WVQ1 401 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 FAM151AQ8WW52 585 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 DNAJC19Q96DA6 116 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 AURKBQ96GD4 344 aaPredicted RBP2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 OXGR1Q96P68 337 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 DEFB118Q96PH6 123 aa2.37□□□□□ -2.03
SMCHD1-202ENST00000577300 MGLLQ99685 303 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms