RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CD82P27701 267 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 PMELP40967 661 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 FAM27BQ5VT28 67 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 C1QL2Q7Z5L3 287 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 ZNF738Q8NE65 137 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 TMEM230Q96A57 120 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 GPR146Q96CH1 333 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 DNAJC13O75165 2243 aa11.38□□□□□ -0.59
PCDHGB3-201ENST00000576222 G6PCP35575 357 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 MPLP40238 635 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 UCP3P55916 312 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 HIST3H3Q16695 136 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 BTNL3Q6UXE8 466 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 SPNS3Q6ZMD2 512 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 GSX1Q9H4S2 264 aaPredicted RBP11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 TMEM167BQ9NRX6 74 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 CLN8Q9UBY8 286 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 DOCK6Q96HP0 2047 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 HIST1H2BKO60814 126 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 KBTBD11O94819 623 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 IGHMP01871 453 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 HIST1H2BJP06899 126 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 NDUFB7P17568 137 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 HIST1H2BOP23527 126 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 MPZP25189 248 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 HIST1H2BBP33778 126 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 HIST1H2BDP58876 126 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 HIST1H2BCP62807 126 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 IGLV3-21P80748 117 aaPredicted RBP11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 HIST2H2BEQ16778 126 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 DEFB108BQ8NET1 73 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 OR4B1Q8NGF8 309 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 OR4P4Q8NGL7 312 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 HIST1H2BHQ93079 126 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 TP53RKQ96S44 253 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 HIST1H2BNQ99877 126 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 HIST1H2BMQ99879 126 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 TMEM38BQ9NVV0 291 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 SERTM2A0A1B0GWG4 89 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 A0A1W2PQF6 199 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 POU2F2P09086 479 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 ADCYAP1P18509 176 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 SRD5A2P31213 254 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 HEPN1Q6WQI6 88 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 FA2HQ7L5A8 372 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 OR5D13Q8NGL4 314 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 MRGPRDQ8TDS7 321 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 NDUFAF3Q9BU61 184 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 PARLQ9H300 379 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 TRBV6-7A0A0A0MS04 114 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 FCER1GP30273 86 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 CCL7P80098 99 aa11.37□□□□□ -0.59
PCDHGB3-201ENST00000576222 HELTA6NFD8 242 aa11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 LRRC3CA6NJW4 275 aa11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 NDUFS6O75380 124 aaKnown RBP11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 ZNF718Q3SXZ3 478 aa11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 D2HGDHQ8N465 521 aa11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 R3HDM4Q96D70 268 aa11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 TMEM191AQ9H0A3 160 aa11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 DEFB127Q9H1M4 99 aa11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 SRSF10O75494 262 aaKnown RBP11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 CXorf1O96002 111 aa11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 PSG5Q15238 335 aa11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 H1FXQ92522 213 aaKnown RBP11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 WBP1LQ9NX94 342 aa11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 PGLYRP1O75594 196 aaPredicted RBP11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 FOXL2P58012 376 aa11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 TFF2Q03403 129 aa11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 HERPUD1Q15011 391 aa11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 WDR81Q562E7 1941 aa11.36□□□□□ -0.59
PCDHGB3-201ENST00000576222 FAM157CP0CG43 387 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 TMEM178AQ8NBL3 297 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 OR5A2Q8NGI9 324 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 HSD17B10Q99714 261 aaKnown RBP11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 TMEM204Q9BSN7 226 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 CACNA1DQ01668 2161 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 FREM3P0C091 2139 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 A0A1W2PPE3 182 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 LINC01387J3KSC0 135 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 COL10A1Q03692 680 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 STARD6P59095 220 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 GMPPAQ96IJ6 420 aaPredicted RBP11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 FER1L6-AS2Q96M78 137 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 UQCR10Q9UDW1 63 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 HEATR5BQ9P2D3 2071 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 NPIPB13A6NJU9 1138 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 NPIPB4C9JG80 1138 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 TMEM250H0YL14 139 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 SPATA45Q537H7 98 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 Q56UQ5 140 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 C6orf15Q6UXA7 325 aaPredicted RBP11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 PAQR4Q8N4S7 273 aaPredicted RBP11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 SCCPDHQ8NBX0 429 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 RCC1LQ96I51 464 aaKnown RBP11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 TECRQ9NZ01 308 aaKnown RBP11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 ATP23Q9Y6H3 246 aa11.35□□□□□ -0.59
PCDHGB3-201ENST00000576222 TET1Q8NFU7 2136 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 IGKV1D-43A0A0B4J1Z2 117 aa11.34□□□□□ -0.59
PCDHGB3-201ENST00000576222 LNP1A1A4G5 178 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms