RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 CDNFQ49AH0 187 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 NHLRC3Q5JS37 347 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 C6orf201Q7Z4U5 140 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 LHFPL4Q7Z7J7 247 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 TRAPPC6BQ86SZ2 158 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 AKAP14Q86UN6 197 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 DYNAPQ8N1N2 210 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 MRGPRDQ8TDS7 321 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 RAB3CQ96E17 227 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 MRPS24Q96EL2 167 aaKnown RBP6.45□□□□□ -1.38
CCDC40-215ENST00000576033 S100A13Q99584 98 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 SULT4A1Q9BR01 284 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 FAM234AQ9H0X4 552 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 C20orf85Q9H1P6 137 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 NUDT15Q9NV35 164 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 RCC2Q9P258 522 aaKnown RBP6.45□□□□□ -1.38
CCDC40-215ENST00000576033 LPAR3Q9UBY5 353 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 NUP50Q9UKX7 468 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 HSF4Q9ULV5 492 aa6.45□□□□□ -1.38
CCDC40-215ENST00000576033 COL6A5A8TX70 2615 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 MEIKINA0A087WXM9 373 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 TRBV23-1A0A0A0MS06 115 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 IGHV3-43A0A0B4J1X8 118 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 IGHV1-69DA0A0B4J2H0 117 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 FAM90A10PA6NDY2 464 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 FAM90A18PA6NE21 464 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 FAM90A16PA6NEW6 464 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 FAM90A20PA6NIJ5 464 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 FAM90A8PA6NJQ4 464 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 FAM90A7PA6NKC0 464 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 SERPINE3A8MV23 424 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 FAM90A22PA8MWA6 464 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 FAM90A12PA8MX19 464 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 FAM90A5PA8MXJ8 464 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 FAM90A23PA8MXZ1 464 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 MGST3O14880 152 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 PRAF2O60831 178 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 PEX14O75381 377 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 IGHV1-69P01742 117 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 CD3DP04234 171 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 IL5P05113 134 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 H2AFB2P0C5Z0 115 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 FAM90A15PP0C7V4 464 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 FAM90A13PP0C7W8 464 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 FAM90A14PP0C7W9 464 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 FAM90A24PP0C7X0 464 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 IGHV3-43DP0DP04 118 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 GTF2F2P13984 249 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 CHATP28329 748 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 SAA4P35542 130 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 ARL6IP1Q15041 203 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 KRTAP24-1Q3LI83 254 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 STEAP1BQ6NZ63 245 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 KIR3DL3Q8N743 410 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 OR4D10Q8NGI6 311 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 OR4K15Q8NH41 348 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 RFESDQ8TAC1 157 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 NANPQ8TBE9 248 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 NEK7Q8TDX7 302 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 AJUBAQ96IF1 538 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 ARHGAP5-AS1Q96IT6 56 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 ZNF714Q96N38 554 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 MDFIQ99750 246 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 OCSTAMPQ9BR26 566 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 SUCNR1Q9BXA5 334 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 ZNF286AQ9HBT8 521 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 ZNF221Q9UK13 617 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 KPTNQ9Y664 436 aa6.44□□□□□ -1.38
CCDC40-215ENST00000576033 A0A0A6YYJ9 748 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 A0A1W2PPE3 182 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 DNAJC9-AS1A6NH13 148 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 C17orf98A8MV24 154 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 ZNF736B4DX44 427 aaPredicted RBP6.43□□□□□ -1.38
CCDC40-215ENST00000576033 M0R1W7 72 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 DHFRP00374 187 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 ZNF728P0DKX0 622 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 IGHV1-8P0DP01 117 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 GNB3P16520 340 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 RCC1P18754 421 aaPredicted RBP6.43□□□□□ -1.38
CCDC40-215ENST00000576033 CBX5P45973 191 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 RIPPLY3P57055 190 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 RRAS2P62070 204 aaPredicted RBP6.43□□□□□ -1.38
CCDC40-215ENST00000576033 GNMTQ14749 295 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 MEF2DQ14814 521 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 RBMS2Q15434 407 aaKnown RBP6.43□□□□□ -1.38
CCDC40-215ENST00000576033 TUSC1Q2TAM9 212 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 VAX1Q5SQQ9 334 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 GPR157Q5UAW9 335 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 FAAP20Q6NZ36 180 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 ZNF497Q6ZNH5 498 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 HOGA1Q86XE5 327 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 TCTE3Q8IZS6 198 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 ZDHHC22Q8N966 263 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 NUDCD2Q8WVJ2 157 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 MAFIPQ8WZ33 124 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 SNAPC3Q92966 411 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 MRGPRFQ96AM1 343 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 FAAP24Q9BTP7 215 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 PECRQ9BY49 303 aa6.43□□□□□ -1.38
CCDC40-215ENST00000576033 MS4A7Q9GZW8 240 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms