RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 TAF9BQ9HBM6 251 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 SMIM30A4D0T7 59 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 SOCS1O15524 211 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 CHST1O43916 411 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 SLC2A2P11168 524 aaPredicted RBP10.91□□□□□ -0.66
CIITA-210ENST00000575513 TMEM50BP56557 158 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 PROK1P58294 105 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 MXD1Q05195 221 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 CTF1Q16619 201 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 LTC4SQ16873 150 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 PLA1AQ53H76 456 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 ZNF880Q6PDB4 577 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 Q6ZTK2 550 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 MOB1BQ7L9L4 216 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 OR8H3Q8N146 312 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 Q8N2B8 174 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 AKR1E2Q96JD6 320 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 DAPK2Q9UIK4 370 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 SCOCQ9UIL1 159 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 MGAT4AQ9UM21 535 aa10.91□□□□□ -0.66
CIITA-210ENST00000575513 A0A0B4J203 849 aa10.9□□□□□ -0.66
CIITA-210ENST00000575513 FAM90A9PA6NNJ1 464 aa10.9□□□□□ -0.66
CIITA-210ENST00000575513 FAM106CPP0CH98 169 aa10.9□□□□□ -0.66
CIITA-210ENST00000575513 RPS19P39019 145 aaKnown RBP10.9□□□□□ -0.66
CIITA-210ENST00000575513 VEGFCP49767 419 aa10.9□□□□□ -0.66
CIITA-210ENST00000575513 NCS1P62166 190 aa10.9□□□□□ -0.66
CIITA-210ENST00000575513 LSM3P62310 102 aaKnown RBP10.9□□□□□ -0.66
CIITA-210ENST00000575513 ZNF816Q0VGE8 651 aaPredicted RBP10.9□□□□□ -0.66
CIITA-210ENST00000575513 GPR107Q5VW38 600 aa10.9□□□□□ -0.66
CIITA-210ENST00000575513 SLC25A48Q6ZT89 311 aaKnown RBP10.9□□□□□ -0.66
CIITA-210ENST00000575513 ZNF439Q8NDP4 499 aa10.9□□□□□ -0.66
CIITA-210ENST00000575513 LEAP2Q969E1 77 aa10.9□□□□□ -0.66
CIITA-210ENST00000575513 TOMM40LQ969M1 308 aa10.9□□□□□ -0.66
CIITA-210ENST00000575513 GALMQ96C23 342 aa10.9□□□□□ -0.66
CIITA-210ENST00000575513 NAA50Q9GZZ1 169 aaKnown RBP10.9□□□□□ -0.66
CIITA-210ENST00000575513 OR2S2Q9NQN1 319 aa10.9□□□□□ -0.66
CIITA-210ENST00000575513 GNG12Q9UBI6 72 aa10.9□□□□□ -0.66
CIITA-210ENST00000575513 JPT1Q9UK76 154 aa10.9□□□□□ -0.66
CIITA-210ENST00000575513 METTL21EPA6NDL7 271 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 RAB27BO00194 218 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 YPEL1O60688 119 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 RGS11O94810 467 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 IGHV3-7P01780 117 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 GAPDHP04406 335 aaKnown RBP10.89□□□□□ -0.67
CIITA-210ENST00000575513 SNRPBP14678 240 aaKnown RBP10.89□□□□□ -0.67
CIITA-210ENST00000575513 IL3RAP26951 378 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 TGFBR1P36897 503 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 GNG10P50151 68 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 ZNF137PP52743 207 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 EFNB2P52799 333 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 VBP1P61758 197 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 PLA2G7Q13093 441 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 HABP2Q14520 560 aaPredicted RBP10.89□□□□□ -0.67
CIITA-210ENST00000575513 HMGN3Q15651 99 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 MORN2Q502X0 79 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 OR1L1Q8NH94 360 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 OR2T6Q8NHC8 308 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 ST6GALNAC6Q969X2 333 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 SLC25A46Q96AG3 418 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 ARHGAP5-AS1Q96IT6 56 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 YPEL2Q96QA6 119 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 CITED1Q99966 193 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 BCL7BQ9BQE9 202 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 PRSS22Q9GZN4 317 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 ABRACLQ9P1F3 81 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 ETV7Q9Y603 341 aa10.89□□□□□ -0.67
CIITA-210ENST00000575513 M0QZK8 103 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 TXNL1O43396 289 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 OR2F2O95006 317 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 LPLP06858 475 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 SERPINB10P48595 397 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 ARL6IP1Q15041 203 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 PLAC9Q5JTB6 97 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 IDNKQ5T6J7 187 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 TMEM219Q86XT9 240 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 PRR18Q8N4B5 295 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 OR10R2Q8NGX6 335 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 LGALS14Q8TCE9 139 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 KCTD12Q96CX2 325 aaKnown RBP10.88□□□□□ -0.67
CIITA-210ENST00000575513 RAB3CQ96E17 227 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 RBM14Q96PK6 669 aaKnown RBP10.88□□□□□ -0.67
CIITA-210ENST00000575513 PECRQ9BY49 303 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 CHMP1AQ9HD42 196 aaPredicted RBP10.88□□□□□ -0.67
CIITA-210ENST00000575513 C12orf4Q9NQ89 552 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 AK3Q9UIJ7 227 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 FBN3Q75N90 2809 aa10.88□□□□□ -0.67
CIITA-210ENST00000575513 IGHV3-43A0A0B4J1X8 118 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 A0A1W2PPE3 182 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 A0A1W2PPI3 338 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 HSD17B6O14756 317 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 TIMM23O14925 209 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 SCGNO76038 276 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 IGHV3-43DP0DP04 118 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 ZNF134P52741 427 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 TMBIM6P55061 237 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 EBI3Q14213 229 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 CT45A1Q5HYN5 189 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 CT45A3Q8NHU0 189 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 UBALD1Q8TB05 177 aa10.87□□□□□ -0.67
CIITA-210ENST00000575513 RAB2BQ8WUD1 216 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms